RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 LRRC8AQ8IWT6 810 aa16.58■□□□□ 0.24
COL2A1-206ENST00000483376 KCTD6Q8NC69 237 aa16.58■□□□□ 0.24
COL2A1-206ENST00000483376 TMIEQ8NEW7 156 aa16.58■□□□□ 0.24
COL2A1-206ENST00000483376 UBE2Q2Q8WVN8 375 aa16.58■□□□□ 0.24
COL2A1-206ENST00000483376 LRIG1Q96JA1 1093 aa16.58■□□□□ 0.24
COL2A1-206ENST00000483376 SGK2Q9HBY8 427 aa16.58■□□□□ 0.24
COL2A1-206ENST00000483376 CYP8B1Q9UNU6 501 aa16.58■□□□□ 0.24
COL2A1-206ENST00000483376 C3orf70A6NLC5 250 aaPredicted RBP16.57■□□□□ 0.24
COL2A1-206ENST00000483376 TMEM110-MUSTN1A8MSY1 372 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 C1QTNF3-AMACRE9PGA6 284 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 SLC7A4O43246 635 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 SPOPO43791 374 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 PRNPP04156 253 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 AMPD1P23109 780 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 HOXD11P31277 338 aaPredicted RBP16.57■□□□□ 0.24
COL2A1-206ENST00000483376 SLC8A1P32418 973 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 HOXD12P35452 270 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 RECQLP46063 649 aaPredicted RBP16.57■□□□□ 0.24
COL2A1-206ENST00000483376 NUMBP49757 651 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 PAPOLAP51003 745 aaKnown RBP16.57■□□□□ 0.24
COL2A1-206ENST00000483376 IL10RBQ08334 325 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 KIF5AQ12840 1032 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 TAZQ16635 292 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 IFI16Q16666 785 aaKnown RBP16.57■□□□□ 0.24
COL2A1-206ENST00000483376 ANKRD20A8PQ5CZ79 823 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 PEAR1Q5VY43 1037 aaPredicted RBP16.57■□□□□ 0.24
COL2A1-206ENST00000483376 ZNF662Q6ZS27 426 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 MMAAQ8IVH4 418 aaKnown RBP16.57■□□□□ 0.24
COL2A1-206ENST00000483376 GPR161Q8N6U8 529 aaKnown RBP16.57■□□□□ 0.24
COL2A1-206ENST00000483376 PCDH19Q8TAB3 1148 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 FATE1Q969F0 183 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 ZNF419Q96HQ0 510 aaPredicted RBP16.57■□□□□ 0.24
COL2A1-206ENST00000483376 ZNF599Q96NL3 588 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 CALN1Q9BXU9 219 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 ETNK2Q9NVF9 386 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 GMEB2Q9UKD1 530 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 TPX2Q9ULW0 747 aaKnown RBP16.57■□□□□ 0.24
COL2A1-206ENST00000483376 TFR2Q9UP52 801 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 MFHAS1Q9Y4C4 1052 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 WDR87Q6ZQQ6 2873 aa16.57■□□□□ 0.24
COL2A1-206ENST00000483376 MID1O15344 667 aa16.56■□□□□ 0.24
COL2A1-206ENST00000483376 BUB1O43683 1085 aa16.56■□□□□ 0.24
COL2A1-206ENST00000483376 FOXD2O60548 495 aaPredicted RBP16.56■□□□□ 0.24
COL2A1-206ENST00000483376 TMCC1O94876 653 aa16.56■□□□□ 0.24
COL2A1-206ENST00000483376 CHRNA3P32297 505 aa16.56■□□□□ 0.24
COL2A1-206ENST00000483376 CARD16Q5EG05 197 aa16.56■□□□□ 0.24
COL2A1-206ENST00000483376 NCBP2-AS2Q69YL0 99 aa16.56■□□□□ 0.24
COL2A1-206ENST00000483376 DPY19L3Q6ZPD9 716 aa16.56■□□□□ 0.24
COL2A1-206ENST00000483376 KIAA1328Q86T90 577 aa16.56■□□□□ 0.24
COL2A1-206ENST00000483376 FRMD1Q8N878 549 aa16.56■□□□□ 0.24
COL2A1-206ENST00000483376 OR2AP1Q8NGE2 309 aa16.56■□□□□ 0.24
COL2A1-206ENST00000483376 RAPGEF5Q92565 580 aa16.56■□□□□ 0.24
COL2A1-206ENST00000483376 FOXJ1Q92949 421 aa16.56■□□□□ 0.24
COL2A1-206ENST00000483376 TOE1Q96GM8 510 aaKnown RBP16.56■□□□□ 0.24
COL2A1-206ENST00000483376 CELF6Q96J87 481 aaKnown RBP16.56■□□□□ 0.24
COL2A1-206ENST00000483376 RNF157Q96PX1 679 aa16.56■□□□□ 0.24
COL2A1-206ENST00000483376 BTBD1Q9H0C5 482 aa16.56■□□□□ 0.24
COL2A1-206ENST00000483376 CD93Q9NPY3 652 aa16.56■□□□□ 0.24
COL2A1-206ENST00000483376 UBA2Q9UBT2 640 aaPredicted RBP16.56■□□□□ 0.24
COL2A1-206ENST00000483376 IPO11Q9UI26 975 aaKnown RBP16.56■□□□□ 0.24
COL2A1-206ENST00000483376 NCKAP1Q9Y2A7 1128 aa16.56■□□□□ 0.24
COL2A1-206ENST00000483376 FCF1Q9Y324 198 aaKnown RBP16.56■□□□□ 0.24
COL2A1-206ENST00000483376 ADGRG1Q9Y653 693 aa16.56■□□□□ 0.24
COL2A1-206ENST00000483376 DUSP10Q9Y6W6 482 aa16.56■□□□□ 0.24
COL2A1-206ENST00000483376 ZNF292O60281 2723 aa16.56■□□□□ 0.24
COL2A1-206ENST00000483376 NYNRINQ9P2P1 1898 aaKnown RBP16.56■□□□□ 0.24
COL2A1-206ENST00000483376 MAP3K13O43283 966 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 IL1BP01584 269 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 DRD3P35462 400 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 CSNK1DP48730 415 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 SNRPD1P62314 119 aaKnown RBP16.55■□□□□ 0.24
COL2A1-206ENST00000483376 RPL6Q02878 288 aaKnown RBP16.55■□□□□ 0.24
COL2A1-206ENST00000483376 MMRN1Q13201 1228 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 SLC9A4Q6AI14 798 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 DAAM2Q86T65 1068 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 KATNAL2Q8IYT4 538 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 RNF10Q8N5U6 811 aaKnown RBP16.55■□□□□ 0.24
COL2A1-206ENST00000483376 PQLC3Q8N755 202 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 LRRC57Q8N9N7 239 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 PIP4K2CQ8TBX8 421 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 VOPP1Q96AW1 172 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 ERLEC1Q96DZ1 483 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 HEPHQ9BQS7 1158 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 TSGA10Q9BZW7 698 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 KDM4CQ9H3R0 1056 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 FBXL12Q9NXK8 326 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 IL36AQ9UHA7 158 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 SARDHQ9UL12 918 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 INVSQ9Y283 1065 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.55■□□□□ 0.24
COL2A1-206ENST00000483376 WASF2Q9Y6W5 498 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 ABCA7Q8IZY2 2146 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 NUP205Q92621 2012 aa16.55■□□□□ 0.24
COL2A1-206ENST00000483376 PTPRZ1P23471 2315 aaPredicted RBP16.54■□□□□ 0.24
COL2A1-206ENST00000483376 BCLAF3A2AJT9 711 aaKnown RBP16.54■□□□□ 0.24
COL2A1-206ENST00000483376 LRRD1A4D1F6 860 aa16.54■□□□□ 0.24
COL2A1-206ENST00000483376 J3KR12 359 aa16.54■□□□□ 0.24
COL2A1-206ENST00000483376 NRDCO43847 1150 aa16.54■□□□□ 0.24
COL2A1-206ENST00000483376 MAFKO60675 156 aa16.54■□□□□ 0.24
COL2A1-206ENST00000483376 NDUFS2O75306 463 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms