RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 OR6K2Q8NGY2 324 aa13.48□□□□□ -0.25
HDAC1-208ENST00000482310 NSMCE1Q8WV22 266 aa13.48□□□□□ -0.25
HDAC1-208ENST00000482310 TFB1MQ8WVM0 346 aaKnown RBP13.48□□□□□ -0.25
HDAC1-208ENST00000482310 HDAC11Q96DB2 347 aa13.48□□□□□ -0.25
HDAC1-208ENST00000482310 MYO19Q96H55 970 aa13.48□□□□□ -0.25
HDAC1-208ENST00000482310 OLFM3Q96PB7 478 aa13.48□□□□□ -0.25
HDAC1-208ENST00000482310 NELL2Q99435 816 aa13.48□□□□□ -0.25
HDAC1-208ENST00000482310 CINPQ9BW66 212 aaPredicted RBP13.48□□□□□ -0.25
HDAC1-208ENST00000482310 AP1M1Q9BXS5 423 aa13.48□□□□□ -0.25
HDAC1-208ENST00000482310 PDFQ9HBH1 243 aa13.48□□□□□ -0.25
HDAC1-208ENST00000482310 CACNA1IQ9P0X4 2223 aa13.48□□□□□ -0.25
HDAC1-208ENST00000482310 TTC24A2A3L6 582 aaPredicted RBP13.47□□□□□ -0.25
HDAC1-208ENST00000482310 PGRMC1O00264 195 aaKnown RBP13.47□□□□□ -0.25
HDAC1-208ENST00000482310 ADAM23O75077 832 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 CD160O95971 181 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 CHRM1P11229 460 aaPredicted RBP13.47□□□□□ -0.25
HDAC1-208ENST00000482310 TCP1P17987 556 aaKnown RBP13.47□□□□□ -0.25
HDAC1-208ENST00000482310 NTSR1P30989 418 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 NR2C2P49116 596 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 CLCN6P51797 869 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 NRLP54845 237 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 MAXP61244 160 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 RHOAP61586 193 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 MRPS21P82921 87 aaKnown RBP13.47□□□□□ -0.25
HDAC1-208ENST00000482310 IL10RBQ08334 325 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 PPIDQ08752 370 aaKnown RBP13.47□□□□□ -0.25
HDAC1-208ENST00000482310 ITKQ08881 620 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 SLC10A7Q0GE19 358 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 MTAPQ13126 283 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 ZNF235Q14590 738 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 LBRQ14739 615 aaKnown RBP13.47□□□□□ -0.25
HDAC1-208ENST00000482310 PAPD7Q5XG87 772 aaKnown RBP13.47□□□□□ -0.25
HDAC1-208ENST00000482310 KIAA1211LQ6NV74 962 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 BZW1Q7L1Q6 419 aaKnown RBP13.47□□□□□ -0.25
HDAC1-208ENST00000482310 HHIPQ96QV1 700 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 SLC6A17Q9H1V8 727 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 PRDM16Q9HAZ2 1276 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 NT5MQ9NPB1 228 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 SPATA6Q9NWH7 488 aaPredicted RBP13.47□□□□□ -0.25
HDAC1-208ENST00000482310 DNPEPQ9ULA0 475 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 SLC8A2Q9UPR5 921 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 EFR3BQ9Y2G0 817 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 STARD13Q9Y3M8 1113 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 MYLKQ15746 1914 aa13.47□□□□□ -0.25
HDAC1-208ENST00000482310 ZDBF2Q9HCK1 2354 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 ZSCAN5CA6NGD5 496 aaPredicted RBP13.46□□□□□ -0.25
HDAC1-208ENST00000482310 SYNCRIPO60506 623 aaKnown RBP13.46□□□□□ -0.25
HDAC1-208ENST00000482310 SIN3BO75182 1162 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 GJB3O75712 270 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 URI1O94763 535 aaPredicted RBP13.46□□□□□ -0.25
HDAC1-208ENST00000482310 RBP3P10745 1247 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 HNRNPLP14866 589 aaKnown RBP eCLIP13.46□□□□□ -0.25
HDAC1-208ENST00000482310 AOC1P19801 751 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 RBL1P28749 1068 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 GKP32189 559 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 MMP13P45452 471 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 GEMIN4P57678 1058 aaKnown RBP13.46□□□□□ -0.25
HDAC1-208ENST00000482310 ZBTB17Q13105 803 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 STARD3Q14849 445 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 PRKD1Q15139 912 aaPredicted RBP13.46□□□□□ -0.25
HDAC1-208ENST00000482310 CYTH1Q15438 398 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 POM121L1PQ3SYA9 428 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 EOGTQ5NDL2 527 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 TMCO4Q5TGY1 634 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 HEATR6Q6AI08 1181 aaKnown RBP13.46□□□□□ -0.25
HDAC1-208ENST00000482310 TIGD7Q6NT04 549 aaPredicted RBP13.46□□□□□ -0.25
HDAC1-208ENST00000482310 TMEM92Q6UXU6 159 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 TRMT11Q7Z4G4 463 aaKnown RBP13.46□□□□□ -0.25
HDAC1-208ENST00000482310 STK40Q8N2I9 435 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 RASGEF1CQ8N431 466 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 TMEM105Q8N8V8 129 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 GRIN3AQ8TCU5 1115 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 UBE2Q2Q8WVN8 375 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 CCDC114Q96M63 670 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 QKIQ96PU8 341 aaKnown RBP eCLIP13.46□□□□□ -0.25
HDAC1-208ENST00000482310 CHRDQ9H2X0 955 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 TMEM245Q9H330 911 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 ZDHHC6Q9H6R6 413 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 MMP17Q9ULZ9 603 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 HS3ST2Q9Y278 367 aa13.46□□□□□ -0.25
HDAC1-208ENST00000482310 TCRBV21S2A2A0A5A6 115 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 MUSKO15146 869 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 KCNN4O15554 427 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 ATP9BO43861 1147 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 JCHAINP01591 159 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 HLA-DQB2P05538 268 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 CCNB1P14635 433 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 CCNCP24863 283 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 RECQLP46063 649 aaPredicted RBP13.45□□□□□ -0.26
HDAC1-208ENST00000482310 RGRP47804 291 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 SATB1Q01826 763 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 SIX1Q15475 284 aaPredicted RBP13.45□□□□□ -0.26
HDAC1-208ENST00000482310 SLC45A4Q5BKX6 768 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 MARC1Q5VT66 337 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 CDKL3Q8IVW4 592 aaPredicted RBP13.45□□□□□ -0.26
HDAC1-208ENST00000482310 SYNPOQ8N3V7 929 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 FBXL6Q8N531 539 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 TAB3Q8N5C8 712 aaPredicted RBP13.45□□□□□ -0.26
HDAC1-208ENST00000482310 TTC13Q8NBP0 860 aa13.45□□□□□ -0.26
HDAC1-208ENST00000482310 TSEN2Q8NCE0 465 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms