RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 TTC13Q8NBP0 860 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 CCNYQ8ND76 341 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 ACTL9Q8TC94 416 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 MAIP1Q8WWC4 291 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 FAM3CQ92520 227 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 ALG14Q96F25 216 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 HMCESQ96FZ2 354 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 UHRF1Q96T88 793 aaPredicted RBP11.83□□□□□ -0.52
HPS4-212ENST00000481910 FBRSL1Q9HCM7 1045 aaKnown RBP11.83□□□□□ -0.52
HPS4-212ENST00000481910 SMARCAL1Q9NZC9 954 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 INTS6Q9UL03 887 aaKnown RBP11.83□□□□□ -0.52
HPS4-212ENST00000481910 OR51B4Q9Y5P0 310 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 POLR2EP19388 210 aaKnown RBP11.82□□□□□ -0.52
HPS4-212ENST00000481910 MX2P20592 715 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 CD72P21854 359 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 GARSP41250 739 aaKnown RBP11.82□□□□□ -0.52
HPS4-212ENST00000481910 PAFAH1B1P43034 410 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 PDAP1Q13442 181 aaKnown RBP11.82□□□□□ -0.52
HPS4-212ENST00000481910 SERINC3Q13530 473 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 FUT11Q495W5 492 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 MBLAC2Q68D91 279 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 KIAA0907Q7Z7F0 614 aaPredicted RBP11.82□□□□□ -0.52
HPS4-212ENST00000481910 ZC3H18Q86VM9 953 aaKnown RBP11.82□□□□□ -0.52
HPS4-212ENST00000481910 CREG2Q8IUH2 290 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 PHTF2Q8N3S3 785 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 TERB1Q8NA31 727 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 MSANTD3Q96H12 275 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 FAM118BQ9BPY3 351 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 C2orf49Q9BVC5 232 aaPredicted RBP11.82□□□□□ -0.52
HPS4-212ENST00000481910 YIPF2Q9BWQ6 316 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 CIPCQ9C0C6 399 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 ARHGEF3Q9NR81 526 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 RAD54BQ9Y620 910 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 KIAA1549LQ6ZVL6 1849 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 PRRT4C9JH25 899 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 MAN2B1O00754 1011 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 KDELR3O43731 214 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 MNAT1P51948 309 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 GALNT2Q10471 571 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 GRSF1Q12849 480 aaKnown RBP eCLIP11.82□□□□□ -0.52
HPS4-212ENST00000481910 PDK1Q15118 436 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 NOMO1Q15155 1222 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 TMEM215Q68D42 235 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 ZNF852Q6ZMS4 543 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 ARHGAP36Q6ZRI8 547 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 LRRC49Q8IUZ0 686 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 ATPAF2Q8N5M1 289 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 DCAF4L2Q8NA75 395 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 WFIKKN2Q8TEU8 576 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 LRRN4Q8WUT4 740 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 PMM1Q92871 262 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 ACDQ96AP0 544 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 LGMNQ99538 433 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 AP1M1Q9BXS5 423 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 ACE2Q9BYF1 805 aaPredicted RBP11.82□□□□□ -0.52
HPS4-212ENST00000481910 SP110Q9HB58 689 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 QPCTLQ9NXS2 382 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 RNF14Q9UBS8 474 aa11.82□□□□□ -0.52
HPS4-212ENST00000481910 IPO11Q9UI26 975 aaKnown RBP11.82□□□□□ -0.52
HPS4-212ENST00000481910 R3HDM2Q9Y2K5 976 aaKnown RBP11.82□□□□□ -0.52
HPS4-212ENST00000481910 SHROOM3Q8TF72 1996 aa11.81□□□□□ -0.52
HPS4-212ENST00000481910 NYNRINQ9P2P1 1898 aaKnown RBP11.81□□□□□ -0.52
HPS4-212ENST00000481910 A0A0A0MRY4 1105 aa11.81□□□□□ -0.52
HPS4-212ENST00000481910 KRIT1O00522 736 aa11.81□□□□□ -0.52
HPS4-212ENST00000481910 SNAP91O60641 907 aa11.81□□□□□ -0.52
HPS4-212ENST00000481910 MAFKO60675 156 aa11.81□□□□□ -0.52
HPS4-212ENST00000481910 ATP5BP06576 529 aaKnown RBP11.81□□□□□ -0.52
HPS4-212ENST00000481910 MSL3P1P0C860 447 aa11.81□□□□□ -0.52
HPS4-212ENST00000481910 GLDCP23378 1020 aa11.81□□□□□ -0.52
HPS4-212ENST00000481910 EIF3EP60228 445 aaKnown RBP11.81□□□□□ -0.52
HPS4-212ENST00000481910 PRKCQQ04759 706 aa11.81□□□□□ -0.52
HPS4-212ENST00000481910 SULT2A1Q06520 285 aa11.81□□□□□ -0.52
HPS4-212ENST00000481910 AP1B1Q10567 949 aa11.81□□□□□ -0.52
HPS4-212ENST00000481910 EIF4HQ15056 248 aaKnown RBP11.81□□□□□ -0.52
HPS4-212ENST00000481910 TMEM196Q5HYL7 178 aa11.81□□□□□ -0.52
HPS4-212ENST00000481910 B4GALNT4Q76KP1 1039 aa11.81□□□□□ -0.52
HPS4-212ENST00000481910 SFTPA1Q8IWL2 248 aa11.81□□□□□ -0.52
HPS4-212ENST00000481910 SIX5Q8N196 739 aa11.81□□□□□ -0.52
HPS4-212ENST00000481910 C1orf54Q8WWF1 131 aa11.81□□□□□ -0.52
HPS4-212ENST00000481910 SHDQ96IW2 340 aa11.81□□□□□ -0.52
HPS4-212ENST00000481910 DHRS1Q96LJ7 313 aa11.81□□□□□ -0.52
HPS4-212ENST00000481910 OLFM3Q96PB7 478 aa11.81□□□□□ -0.52
HPS4-212ENST00000481910 ELOVL2Q9NXB9 296 aa11.81□□□□□ -0.52
HPS4-212ENST00000481910 VPS51Q9UID3 782 aa11.81□□□□□ -0.52
HPS4-212ENST00000481910 CDC23Q9UJX2 597 aa11.81□□□□□ -0.52
HPS4-212ENST00000481910 KRBA1A5PL33 1030 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 SHISA7A6NL88 538 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 H7C0C1 242 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 J3KR12 359 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 MCF2LO15068 1137 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 RBP3P10745 1247 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 CCNCP24863 283 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 ATP5OP48047 213 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 ZXDAP98168 799 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 XRCC4Q13426 336 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 SIX1Q15475 284 aaPredicted RBP11.8□□□□□ -0.52
HPS4-212ENST00000481910 RETSATQ6NUM9 610 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 LINGO4Q6UY18 593 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 FAM76AQ8TAV0 307 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 UCMAQ8WVF2 138 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms