RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 YWHAQP27348 245 aa9.35□□□□□ -0.91
CUL3-209ENST00000481135 PTPN9P43378 593 aa9.35□□□□□ -0.91
CUL3-209ENST00000481135 CCR9P51686 369 aa9.35□□□□□ -0.91
CUL3-209ENST00000481135 CLCNKBP51801 687 aa9.35□□□□□ -0.91
CUL3-209ENST00000481135 RPE65Q16518 533 aa9.35□□□□□ -0.91
CUL3-209ENST00000481135 MIDNQ504T8 468 aa9.35□□□□□ -0.91
CUL3-209ENST00000481135 ATF7IPQ6VMQ6 1270 aa9.35□□□□□ -0.91
CUL3-209ENST00000481135 PRSS45Q7RTY3 260 aa9.35□□□□□ -0.91
CUL3-209ENST00000481135 CHD1LQ86WJ1 897 aa9.35□□□□□ -0.91
CUL3-209ENST00000481135 DNAJC10Q8IXB1 793 aa9.35□□□□□ -0.91
CUL3-209ENST00000481135 C11orf65Q8NCR3 313 aa9.35□□□□□ -0.91
CUL3-209ENST00000481135 PRSS3P2Q8NHM4 247 aa9.35□□□□□ -0.91
CUL3-209ENST00000481135 TDRD7Q8NHU6 1098 aaKnown RBP9.35□□□□□ -0.91
CUL3-209ENST00000481135 CENPIQ92674 756 aaPredicted RBP9.35□□□□□ -0.91
CUL3-209ENST00000481135 CRAMP1Q96RY5 1269 aa9.35□□□□□ -0.91
CUL3-209ENST00000481135 MPHOSPH8Q99549 860 aa9.35□□□□□ -0.91
CUL3-209ENST00000481135 PRSS22Q9GZN4 317 aa9.35□□□□□ -0.91
CUL3-209ENST00000481135 SLC25A18Q9H1K4 315 aa9.35□□□□□ -0.91
CUL3-209ENST00000481135 SLITRK6Q9H5Y7 841 aa9.35□□□□□ -0.91
CUL3-209ENST00000481135 RNF146Q9NTX7 359 aa9.35□□□□□ -0.91
CUL3-209ENST00000481135 RNMTO43148 476 aaKnown RBP9.34□□□□□ -0.91
CUL3-209ENST00000481135 CD72P21854 359 aa9.34□□□□□ -0.91
CUL3-209ENST00000481135 TSTQ16762 297 aaKnown RBP9.34□□□□□ -0.91
CUL3-209ENST00000481135 UBAP2Q5T6F2 1119 aaKnown RBP9.34□□□□□ -0.91
CUL3-209ENST00000481135 WDR78Q5VTH9 848 aa9.34□□□□□ -0.91
CUL3-209ENST00000481135 ANKRD13BQ86YJ7 626 aa9.34□□□□□ -0.91
CUL3-209ENST00000481135 SLC44A5Q8NCS7 719 aa9.34□□□□□ -0.91
CUL3-209ENST00000481135 ZNF419Q96HQ0 510 aaPredicted RBP9.34□□□□□ -0.91
CUL3-209ENST00000481135 ORC3Q9UBD5 711 aaPredicted RBP9.34□□□□□ -0.91
CUL3-209ENST00000481135 NLKQ9UBE8 527 aa9.34□□□□□ -0.91
CUL3-209ENST00000481135 SARDHQ9UL12 918 aa9.34□□□□□ -0.91
CUL3-209ENST00000481135 TEX13CA0A0J9YWL9 993 aa9.33□□□□□ -0.92
CUL3-209ENST00000481135 TARSL2A2RTX5 802 aaKnown RBP9.33□□□□□ -0.92
CUL3-209ENST00000481135 KCNU1A8MYU2 1149 aa9.33□□□□□ -0.92
CUL3-209ENST00000481135 HSPA1AP0DMV8 641 aaKnown RBP9.33□□□□□ -0.92
CUL3-209ENST00000481135 HSPA1BP0DMV9 641 aaKnown RBP9.33□□□□□ -0.92
CUL3-209ENST00000481135 CHMP24386 653 aa9.33□□□□□ -0.92
CUL3-209ENST00000481135 YWHAZP63104 245 aaKnown RBP9.33□□□□□ -0.92
CUL3-209ENST00000481135 FBXO43Q4G163 708 aa9.33□□□□□ -0.92
CUL3-209ENST00000481135 LCE5AQ5TCM9 118 aa9.33□□□□□ -0.92
CUL3-209ENST00000481135 PAPD7Q5XG87 772 aaKnown RBP9.33□□□□□ -0.92
CUL3-209ENST00000481135 TMEM81Q6P7N7 255 aa9.33□□□□□ -0.92
CUL3-209ENST00000481135 C17orf99Q6UX52 265 aa9.33□□□□□ -0.92
CUL3-209ENST00000481135 TBC1D1Q86TI0 1168 aaPredicted RBP9.33□□□□□ -0.92
CUL3-209ENST00000481135 DDB2Q92466 427 aa9.33□□□□□ -0.92
CUL3-209ENST00000481135 ZDHHC7Q9NXF8 308 aa9.33□□□□□ -0.92
CUL3-209ENST00000481135 NAALADL1Q9UQQ1 740 aa9.33□□□□□ -0.92
CUL3-209ENST00000481135 SLC4A4Q9Y6R1 1079 aa9.33□□□□□ -0.92
CUL3-209ENST00000481135 TRBV5-3A0A0A0MS03 114 aa9.32□□□□□ -0.92
CUL3-209ENST00000481135 C17orf102A2RUQ5 167 aa9.32□□□□□ -0.92
CUL3-209ENST00000481135 DDX58O95786 925 aaKnown RBP9.32□□□□□ -0.92
CUL3-209ENST00000481135 KELP23276 732 aa9.32□□□□□ -0.92
CUL3-209ENST00000481135 ABCD1P33897 745 aa9.32□□□□□ -0.92
CUL3-209ENST00000481135 SRSF4Q08170 494 aaKnown RBP9.32□□□□□ -0.92
CUL3-209ENST00000481135 SUPT20HL1Q3ZLR7 823 aa9.32□□□□□ -0.92
CUL3-209ENST00000481135 SYCE2Q6PIF2 218 aa9.32□□□□□ -0.92
CUL3-209ENST00000481135 B4GALNT4Q76KP1 1039 aa9.32□□□□□ -0.92
CUL3-209ENST00000481135 TADA2BQ86TJ2 420 aa9.32□□□□□ -0.92
CUL3-209ENST00000481135 DIS3L2Q8IYB7 885 aaKnown RBP9.32□□□□□ -0.92
CUL3-209ENST00000481135 SLC25A41Q8N5S1 370 aa9.32□□□□□ -0.92
CUL3-209ENST00000481135 ADAMTS15Q8TE58 950 aa9.32□□□□□ -0.92
CUL3-209ENST00000481135 WDR83Q9BRX9 315 aaKnown RBP9.32□□□□□ -0.92
CUL3-209ENST00000481135 AAMDCQ9H7C9 122 aa9.32□□□□□ -0.92
CUL3-209ENST00000481135 BABAM1Q9NWV8 329 aa9.32□□□□□ -0.92
CUL3-209ENST00000481135 CDH22Q9UJ99 828 aa9.32□□□□□ -0.92
CUL3-209ENST00000481135 ARHGEF17Q96PE2 2063 aaPredicted RBP9.32□□□□□ -0.92
CUL3-209ENST00000481135 E5RJQ4 531 aa9.31□□□□□ -0.92
CUL3-209ENST00000481135 TLR2O60603 784 aa9.31□□□□□ -0.92
CUL3-209ENST00000481135 CELA2AP08217 269 aa9.31□□□□□ -0.92
CUL3-209ENST00000481135 UBL4AP11441 157 aa9.31□□□□□ -0.92
CUL3-209ENST00000481135 CAPN3P20807 821 aa9.31□□□□□ -0.92
CUL3-209ENST00000481135 EPHA8P29322 1005 aaPredicted RBP9.31□□□□□ -0.92
CUL3-209ENST00000481135 FMO4P31512 558 aa9.31□□□□□ -0.92
CUL3-209ENST00000481135 ARSFP54793 590 aa9.31□□□□□ -0.92
CUL3-209ENST00000481135 EIF5P55010 431 aaKnown RBP9.31□□□□□ -0.92
CUL3-209ENST00000481135 NEXNQ0ZGT2 675 aa9.31□□□□□ -0.92
CUL3-209ENST00000481135 FOXD4Q12950 439 aaPredicted RBP9.31□□□□□ -0.92
CUL3-209ENST00000481135 TRIP6Q15654 476 aaKnown RBP9.31□□□□□ -0.92
CUL3-209ENST00000481135 SRSF7Q16629 238 aaKnown RBP eCLIP9.31□□□□□ -0.92
CUL3-209ENST00000481135 ENTPD8Q5MY95 495 aa9.31□□□□□ -0.92
CUL3-209ENST00000481135 C6orf10Q5SRN2 563 aa9.31□□□□□ -0.92
CUL3-209ENST00000481135 KDELC2Q7Z4H8 507 aa9.31□□□□□ -0.92
CUL3-209ENST00000481135 TMC8Q8IU68 726 aa9.31□□□□□ -0.92
CUL3-209ENST00000481135 KLHL29Q96CT2 875 aa9.31□□□□□ -0.92
CUL3-209ENST00000481135 CXorf56Q9H5V9 222 aa9.31□□□□□ -0.92
CUL3-209ENST00000481135 THSD1Q9NS62 852 aa9.31□□□□□ -0.92
CUL3-209ENST00000481135 TMEM184CQ9NVA4 438 aa9.31□□□□□ -0.92
CUL3-209ENST00000481135 PCDHGB5Q9Y5G0 923 aa9.31□□□□□ -0.92
CUL3-209ENST00000481135 TDRD9Q8NDG6 1382 aaKnown RBP9.3□□□□□ -0.92
CUL3-209ENST00000481135 TRBV5-7A0A0A0MS05 114 aa9.3□□□□□ -0.92
CUL3-209ENST00000481135 PABPN1LA6NDY0 278 aaKnown RBP9.3□□□□□ -0.92
CUL3-209ENST00000481135 FAM157AC9JC47 383 aa9.3□□□□□ -0.92
CUL3-209ENST00000481135 PRR35P0CG20 571 aa9.3□□□□□ -0.92
CUL3-209ENST00000481135 EIF3BP55884 814 aaKnown RBP9.3□□□□□ -0.92
CUL3-209ENST00000481135 KRT32Q14532 448 aa9.3□□□□□ -0.92
CUL3-209ENST00000481135 EZH2Q15910 746 aaKnown RBP9.3□□□□□ -0.92
CUL3-209ENST00000481135 ZNF667Q5HYK9 610 aa9.3□□□□□ -0.92
CUL3-209ENST00000481135 CCDC30Q5VVM6 783 aa9.3□□□□□ -0.92
CUL3-209ENST00000481135 TMTC3Q6ZXV5 915 aa9.3□□□□□ -0.92
CUL3-209ENST00000481135 CPLX4Q7Z7G2 160 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms