RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ATPAF2Q8N5M1 289 aa20.11■□□□□ 0.81
LIME1-205ENST00000480139 FATE1Q969F0 183 aa20.11■□□□□ 0.81
LIME1-205ENST00000480139 MTG2Q9H4K7 406 aa20.11■□□□□ 0.81
LIME1-205ENST00000480139 SP110Q9HB58 689 aa20.11■□□□□ 0.81
LIME1-205ENST00000480139 UBA2Q9UBT2 640 aaPredicted RBP20.11■□□□□ 0.81
LIME1-205ENST00000480139 H0Y858 1186 aa20.1■□□□□ 0.81
LIME1-205ENST00000480139 MCF2LO15068 1137 aa20.1■□□□□ 0.81
LIME1-205ENST00000480139 MAFKO60675 156 aa20.1■□□□□ 0.81
LIME1-205ENST00000480139 LILRB5O75023 590 aa20.1■□□□□ 0.81
LIME1-205ENST00000480139 TMCC1O94876 653 aa20.1■□□□□ 0.81
LIME1-205ENST00000480139 VAV1P15498 845 aa20.1■□□□□ 0.81
LIME1-205ENST00000480139 MX2P20592 715 aa20.1■□□□□ 0.81
LIME1-205ENST00000480139 CETN2P41208 172 aa20.1■□□□□ 0.81
LIME1-205ENST00000480139 GARSP41250 739 aaKnown RBP20.1■□□□□ 0.81
LIME1-205ENST00000480139 FNTBP49356 437 aa20.1■□□□□ 0.81
LIME1-205ENST00000480139 GBE1Q04446 702 aa20.1■□□□□ 0.81
LIME1-205ENST00000480139 TMCO4Q5TGY1 634 aa20.1■□□□□ 0.81
LIME1-205ENST00000480139 MEI1Q5TIA1 1274 aa20.1■□□□□ 0.81
LIME1-205ENST00000480139 ZNF776Q68DI1 518 aaPredicted RBP20.1■□□□□ 0.81
LIME1-205ENST00000480139 ZC3H14Q6PJT7 736 aaKnown RBP20.1■□□□□ 0.81
LIME1-205ENST00000480139 ARHGAP36Q6ZRI8 547 aa20.1■□□□□ 0.81
LIME1-205ENST00000480139 Q6ZVU0 165 aa20.1■□□□□ 0.81
LIME1-205ENST00000480139 TMPRSS6Q8IU80 811 aa20.1■□□□□ 0.81
LIME1-205ENST00000480139 NETO2Q8NC67 525 aa20.1■□□□□ 0.81
LIME1-205ENST00000480139 OR2A12Q8NGT7 310 aa20.1■□□□□ 0.81
LIME1-205ENST00000480139 OR8D1Q8WZ84 308 aa20.1■□□□□ 0.81
LIME1-205ENST00000480139 TSGA13Q96PP4 275 aa20.1■□□□□ 0.81
LIME1-205ENST00000480139 FAM129BQ96TA1 746 aa20.1■□□□□ 0.81
LIME1-205ENST00000480139 DTLQ9NZJ0 730 aa20.1■□□□□ 0.81
LIME1-205ENST00000480139 PACSIN2Q9UNF0 486 aaPredicted RBP20.1■□□□□ 0.81
LIME1-205ENST00000480139 FCF1Q9Y324 198 aaKnown RBP20.1■□□□□ 0.81
LIME1-205ENST00000480139 GOLGA6L9A6NEM1 432 aa20.09■□□□□ 0.81
LIME1-205ENST00000480139 RNASEH1O60930 286 aaKnown RBP20.09■□□□□ 0.81
LIME1-205ENST00000480139 GSRP00390 522 aa20.09■□□□□ 0.81
LIME1-205ENST00000480139 TGM2P21980 687 aa20.09■□□□□ 0.81
LIME1-205ENST00000480139 PXNP49023 591 aaPredicted RBP20.09■□□□□ 0.81
LIME1-205ENST00000480139 NR2C2P49116 596 aa20.09■□□□□ 0.81
LIME1-205ENST00000480139 ZNF33AQ06730 810 aa20.09■□□□□ 0.81
LIME1-205ENST00000480139 HEATR6Q6AI08 1181 aaKnown RBP20.09■□□□□ 0.81
LIME1-205ENST00000480139 DSG4Q86SJ6 1040 aa20.09■□□□□ 0.81
LIME1-205ENST00000480139 PGBD3Q8N328 593 aa20.09■□□□□ 0.81
LIME1-205ENST00000480139 PRCCQ92733 491 aaPredicted RBP20.09■□□□□ 0.81
LIME1-205ENST00000480139 HDAC11Q96DB2 347 aa20.09■□□□□ 0.81
LIME1-205ENST00000480139 SIPA1Q96FS4 1042 aa20.09■□□□□ 0.81
LIME1-205ENST00000480139 SCML1Q9UN30 329 aa20.09■□□□□ 0.81
LIME1-205ENST00000480139 FARP1Q9Y4F1 1045 aaPredicted RBP20.09■□□□□ 0.81
LIME1-205ENST00000480139 ACTL7AQ9Y615 435 aa20.09■□□□□ 0.81
LIME1-205ENST00000480139 WDFY4Q6ZS81 3184 aa20.08■□□□□ 0.81
LIME1-205ENST00000480139 CST8O60676 142 aa20.08■□□□□ 0.81
LIME1-205ENST00000480139 ZNF217O75362 1048 aa20.08■□□□□ 0.81
LIME1-205ENST00000480139 PEX11BO96011 259 aa20.08■□□□□ 0.81
LIME1-205ENST00000480139 PYGMP11217 842 aa20.08■□□□□ 0.81
LIME1-205ENST00000480139 KRT10P13645 584 aa20.08■□□□□ 0.81
LIME1-205ENST00000480139 RECQLP46063 649 aaPredicted RBP20.08■□□□□ 0.81
LIME1-205ENST00000480139 RPS14P62263 151 aaKnown RBP20.08■□□□□ 0.81
LIME1-205ENST00000480139 SLC10A2Q12908 348 aaPredicted RBP20.08■□□□□ 0.81
LIME1-205ENST00000480139 BYSLQ13895 437 aaKnown RBP20.08■□□□□ 0.81
LIME1-205ENST00000480139 USP39Q53GS9 565 aaKnown RBP20.08■□□□□ 0.81
LIME1-205ENST00000480139 CARD16Q5EG05 197 aa20.08■□□□□ 0.81
LIME1-205ENST00000480139 TIGD7Q6NT04 549 aaPredicted RBP20.08■□□□□ 0.81
LIME1-205ENST00000480139 LEKR1Q6ZMV7 388 aa20.08■□□□□ 0.81
LIME1-205ENST00000480139 BBS12Q6ZW61 710 aa20.08■□□□□ 0.81
LIME1-205ENST00000480139 BZW1Q7L1Q6 419 aaKnown RBP20.08■□□□□ 0.81
LIME1-205ENST00000480139 STK40Q8N2I9 435 aa20.08■□□□□ 0.81
LIME1-205ENST00000480139 OR2AP1Q8NGE2 309 aa20.08■□□□□ 0.81
LIME1-205ENST00000480139 ERLEC1Q96DZ1 483 aa20.08■□□□□ 0.81
LIME1-205ENST00000480139 OLFM3Q96PB7 478 aa20.08■□□□□ 0.81
LIME1-205ENST00000480139 TPSD1Q9BZJ3 242 aa20.08■□□□□ 0.81
LIME1-205ENST00000480139 BRD8Q9H0E9 1235 aa20.08■□□□□ 0.81
LIME1-205ENST00000480139 USP36Q9P275 1121 aaKnown RBP20.08■□□□□ 0.81
LIME1-205ENST00000480139 PYCARDQ9ULZ3 195 aa20.08■□□□□ 0.81
LIME1-205ENST00000480139 SHROOM3Q8TF72 1996 aa20.08■□□□□ 0.8
LIME1-205ENST00000480139 ADH1BP00325 375 aa20.07■□□□□ 0.8
LIME1-205ENST00000480139 IGLV3-19P01714 112 aa20.07■□□□□ 0.8
LIME1-205ENST00000480139 CCNCP24863 283 aa20.07■□□□□ 0.8
LIME1-205ENST00000480139 RHOAP61586 193 aa20.07■□□□□ 0.8
LIME1-205ENST00000480139 SNRPD1P62314 119 aaKnown RBP20.07■□□□□ 0.8
LIME1-205ENST00000480139 CYTH1Q15438 398 aa20.07■□□□□ 0.8
LIME1-205ENST00000480139 CST6Q15828 149 aa20.07■□□□□ 0.8
LIME1-205ENST00000480139 KAZNQ674X7 775 aa20.07■□□□□ 0.8
LIME1-205ENST00000480139 KIAA1324Q6UXG2 1013 aaKnown RBP20.07■□□□□ 0.8
LIME1-205ENST00000480139 DPY19L3Q6ZPD9 716 aa20.07■□□□□ 0.8
LIME1-205ENST00000480139 TMIEQ8NEW7 156 aa20.07■□□□□ 0.8
LIME1-205ENST00000480139 GAB3Q8WWW8 586 aa20.07■□□□□ 0.8
LIME1-205ENST00000480139 GDAP1L1Q96MZ0 367 aa20.07■□□□□ 0.8
LIME1-205ENST00000480139 OSBPL8Q9BZF1 889 aa20.07■□□□□ 0.8
LIME1-205ENST00000480139 SLC6A17Q9H1V8 727 aa20.07■□□□□ 0.8
LIME1-205ENST00000480139 TNKS2Q9H2K2 1166 aa20.07■□□□□ 0.8
LIME1-205ENST00000480139 ITM2CQ9NQX7 267 aa20.07■□□□□ 0.8
LIME1-205ENST00000480139 LHX3Q9UBR4 397 aa20.07■□□□□ 0.8
LIME1-205ENST00000480139 PPM1HQ9ULR3 514 aa20.07■□□□□ 0.8
LIME1-205ENST00000480139 HEY1Q9Y5J3 304 aa20.07■□□□□ 0.8
LIME1-205ENST00000480139 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.07■□□□□ 0.8
LIME1-205ENST00000480139 PPP1R12AO14974 1030 aaPredicted RBP20.06■□□□□ 0.8
LIME1-205ENST00000480139 IGSF6O95976 241 aa20.06■□□□□ 0.8
LIME1-205ENST00000480139 DNTTP04053 509 aa20.06■□□□□ 0.8
LIME1-205ENST00000480139 PRNPP04156 253 aa20.06■□□□□ 0.8
LIME1-205ENST00000480139 ACADMP11310 421 aa20.06■□□□□ 0.8
LIME1-205ENST00000480139 HSPA9P38646 679 aaKnown RBP20.06■□□□□ 0.8
LIME1-205ENST00000480139 P2RY2P41231 377 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms