RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 SLC25A52Q3SY17 297 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 PTPN20Q4JDL3 420 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 ANO6Q4KMQ2 910 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 PIK3R6Q5UE93 754 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 LAIR1Q6GTX8 287 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 SARM1Q6SZW1 724 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 CHST9Q7L1S5 443 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 RSRC2Q7L4I2 434 aaKnown RBP5.07□□□□□ -1.6
PTCD3-213ENST00000480102 STRADAQ7RTN6 431 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 THAP5Q7Z6K1 395 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 ATG4DQ86TL0 474 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-213ENST00000480102 SLC47A2Q86VL8 602 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 TMEM25Q86YD3 366 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 PSTKQ8IV42 348 aaKnown RBP5.07□□□□□ -1.6
PTCD3-213ENST00000480102 AHI1Q8N157 1196 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 IL17RCQ8NAC3 791 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 SUMF1Q8NBK3 374 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 HJURPQ8NCD3 748 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-213ENST00000480102 C3orf20Q8ND61 904 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 LRRN4CLQ8ND94 238 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 OLIG1Q8TAK6 271 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 FIBINQ8TAL6 211 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 UCMAQ8WVF2 138 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 ATRIPQ8WXE1 791 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 UBXN4Q92575 508 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 CENPIQ92674 756 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-213ENST00000480102 NKD2Q969F2 451 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-213ENST00000480102 NTAN1Q96AB6 310 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 C18orf8Q96DM3 657 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 PIWIL1Q96J94 861 aaKnown RBP5.07□□□□□ -1.6
PTCD3-213ENST00000480102 SPAG5Q96R06 1193 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 HAPLN3Q96S86 360 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 CPXM1Q96SM3 734 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 NPY6RQ99463 290 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 CRACR2AQ9BSW2 395 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 ANP32EQ9BTT0 268 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 ARHGEF38Q9NXL2 777 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 SLC12A6Q9UHW9 1150 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 CYTH4Q9UIA0 394 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 TMEM59LQ9UK28 342 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 STAP1Q9ULZ2 295 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 SCML1Q9UN30 329 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 TBC1D30Q9Y2I9 924 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 MTF2Q9Y483 593 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-213ENST00000480102 RNF114Q9Y508 228 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 PCDHGB7Q9Y5F8 929 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 FHOD1Q9Y613 1164 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 WNT6Q9Y6F9 365 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 DOCK8Q8NF50 2099 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 DMDP11532 3685 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 USP34Q70CQ2 3546 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 ANK1P16157 1881 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 COL4A2P08572 1712 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 NOTCH4Q99466 2003 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 TCRBV5S1A1TA0A578 114 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 TYW5A2RUC4 315 aaKnown RBP5.06□□□□□ -1.6
PTCD3-213ENST00000480102 PRR23AA6NEV1 266 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 DRGXA6NNA5 263 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 C10orf142B7Z368 130 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 ACSL4O60488 711 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 CLDN11O75508 207 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 CLSTN1O94985 981 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 TRUB2O95900 331 aaKnown RBP5.06□□□□□ -1.6
PTCD3-213ENST00000480102 APOEP02649 317 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 ATP5BP06576 529 aaKnown RBP5.06□□□□□ -1.6
PTCD3-213ENST00000480102 RETP07949 1114 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 NCAM1P13591 858 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 HOXD9P28356 352 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-213ENST00000480102 NTSR1P30989 418 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 TBX4P57082 545 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 POLR2FP61218 127 aaKnown RBP5.06□□□□□ -1.6
PTCD3-213ENST00000480102 FMO1Q01740 532 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 PTP4A2Q12974 167 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 PON2Q15165 354 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 SYCP1Q15431 976 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 ZSCAN23Q3MJ62 389 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 FAM133BQ5BKY9 247 aaKnown RBP5.06□□□□□ -1.6
PTCD3-213ENST00000480102 MS4A13Q5J8X5 152 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 TRIM68Q6AZZ1 485 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 GRAMD4Q6IC98 578 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 CAVIN1Q6NZI2 390 aaKnown RBP5.06□□□□□ -1.6
PTCD3-213ENST00000480102 DENND1BQ6P3S1 775 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 MON1BQ7L1V2 547 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 IRF2BP2Q7Z5L9 587 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 ANKS1BQ7Z6G8 1248 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 RABEPKQ7Z6M1 372 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 SETD3Q86TU7 594 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-213ENST00000480102 ZSCAN30Q86W11 494 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 ERICH1Q86X53 443 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 XYLT1Q86Y38 959 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 NEK11Q8NG66 645 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 UBA3Q8TBC4 463 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 PIWIL2Q8TC59 973 aaKnown RBP5.06□□□□□ -1.6
PTCD3-213ENST00000480102 RUBCNQ92622 972 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 ATOH1Q92858 354 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-213ENST00000480102 TTC17Q96AE7 1141 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 FAM131CQ96AQ9 280 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 TMA16Q96EY4 203 aaKnown RBP5.06□□□□□ -1.6
PTCD3-213ENST00000480102 ZFYVE19Q96K21 471 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 LMLNQ96KR4 655 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms