RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 PDFQ9HBH1 243 aa9.79□□□□□ -0.84
CD46-214ENST00000480003 USP29Q9HBJ7 922 aa9.79□□□□□ -0.84
CD46-214ENST00000480003 ATP13A1Q9HD20 1204 aa9.79□□□□□ -0.84
CD46-214ENST00000480003 LTB4R2Q9NPC1 389 aa9.79□□□□□ -0.84
CD46-214ENST00000480003 SLCO3A1Q9UIG8 710 aa9.79□□□□□ -0.84
CD46-214ENST00000480003 VPS28Q9UK41 221 aa9.79□□□□□ -0.84
CD46-214ENST00000480003 FBXL21Q9UKT6 434 aa9.79□□□□□ -0.84
CD46-214ENST00000480003 ERVW-1Q9UQF0 538 aa9.79□□□□□ -0.84
CD46-214ENST00000480003 DRG1Q9Y295 367 aaKnown RBP9.79□□□□□ -0.84
CD46-214ENST00000480003 R3HDM2Q9Y2K5 976 aaKnown RBP9.79□□□□□ -0.84
CD46-214ENST00000480003 HEY1Q9Y5J3 304 aa9.79□□□□□ -0.84
CD46-214ENST00000480003 TICRRQ7Z2Z1 1910 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 ZSCAN5CA6NGD5 496 aaPredicted RBP9.78□□□□□ -0.84
CD46-214ENST00000480003 FAM170BA6NMN3 283 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 HACD1B0YJ81 288 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 DFFAO00273 331 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 MATN3O15232 486 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 ZBTB24O43167 697 aaPredicted RBP9.78□□□□□ -0.84
CD46-214ENST00000480003 ATP9BO43861 1147 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 MAP3K6O95382 1288 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 ASLP04424 464 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 ATP5BP06576 529 aaKnown RBP9.78□□□□□ -0.84
CD46-214ENST00000480003 SRPRAP08240 638 aaKnown RBP9.78□□□□□ -0.84
CD46-214ENST00000480003 ALADP13716 330 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 TARSP26639 723 aaKnown RBP9.78□□□□□ -0.84
CD46-214ENST00000480003 MRPS21P82921 87 aaKnown RBP9.78□□□□□ -0.84
CD46-214ENST00000480003 ECT2LQ008S8 904 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 KDSRQ06136 332 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 PPIDQ08752 370 aaKnown RBP9.78□□□□□ -0.84
CD46-214ENST00000480003 HNRNPDQ14103 355 aaKnown RBP9.78□□□□□ -0.84
CD46-214ENST00000480003 PDK1Q15118 436 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 CYTH1Q15438 398 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 CCNG2Q16589 344 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 LONRF2Q1L5Z9 754 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 DGKKQ5KSL6 1271 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 SH2D3CQ8N5H7 860 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 CCDC33Q8N5R6 958 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 TEX26Q8N6G2 289 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 USP33Q8TEY7 942 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 FRS2Q8WU20 508 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 LRRN4Q8WUT4 740 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 UCMAQ8WVF2 138 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 SORCS1Q8WY21 1168 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 MAML1Q92585 1016 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 RPL10LQ96L21 214 aaKnown RBP9.78□□□□□ -0.84
CD46-214ENST00000480003 ZNF599Q96NL3 588 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 LGMNQ99538 433 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 C2orf49Q9BVC5 232 aaPredicted RBP9.78□□□□□ -0.84
CD46-214ENST00000480003 FRMD8P1Q9BZ68 369 aaPredicted RBP9.78□□□□□ -0.84
CD46-214ENST00000480003 TMEM245Q9H330 911 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 LMAN1LQ9HAT1 526 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 CDC23Q9UJX2 597 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 HPCAL4Q9UM19 191 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 HS3ST2Q9Y278 367 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 MRPS17Q9Y2R5 130 aaKnown RBP9.78□□□□□ -0.84
CD46-214ENST00000480003 ACTL7AQ9Y615 435 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 TECTAO75443 2155 aa9.78□□□□□ -0.84
CD46-214ENST00000480003 BCLAF3A2AJT9 711 aaKnown RBP9.77□□□□□ -0.85
CD46-214ENST00000480003 WASH3PC4AMC7 463 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 CBX4O00257 560 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 NPC1O15118 1278 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 SMAD6O43541 496 aaKnown RBP9.77□□□□□ -0.85
CD46-214ENST00000480003 RBP3P10745 1247 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 SRCP12931 536 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 NUMBP49757 651 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 TUBB2AQ13885 445 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 GAS6Q14393 721 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 ZNF234Q14588 700 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 RFTN1Q14699 578 aaPredicted RBP9.77□□□□□ -0.85
CD46-214ENST00000480003 PRKD1Q15139 912 aaPredicted RBP9.77□□□□□ -0.85
CD46-214ENST00000480003 OASLQ15646 514 aaKnown RBP9.77□□□□□ -0.85
CD46-214ENST00000480003 CYP1B1Q16678 543 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 EGFLAMQ63HQ2 1017 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 RETSATQ6NUM9 610 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 ADAT2Q7Z6V5 191 aaKnown RBP9.77□□□□□ -0.85
CD46-214ENST00000480003 CCDC13Q8IYE1 715 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 PRELID2Q8N945 189 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 IL17RCQ8NAC3 791 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 KIF18AQ8NI77 898 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 CCDC26Q8TAB7 109 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 CYB5D2Q8WUJ1 264 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 TFB1MQ8WVM0 346 aaKnown RBP9.77□□□□□ -0.85
CD46-214ENST00000480003 C1orf54Q8WWF1 131 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 CASKIN2Q8WXE0 1202 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 PTPRN2Q92932 1015 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 NKD2Q969F2 451 aaPredicted RBP9.77□□□□□ -0.85
CD46-214ENST00000480003 ISG20Q96AZ6 181 aaKnown RBP9.77□□□□□ -0.85
CD46-214ENST00000480003 ACOX2Q99424 681 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 NAP1L3Q99457 506 aaPredicted RBP9.77□□□□□ -0.85
CD46-214ENST00000480003 IL12RB2Q99665 862 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 TUBB2BQ9BVA1 445 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 C10orf88Q9H8K7 445 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 TBC1D17Q9HA65 648 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 SMARCAL1Q9NZC9 954 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 SUN2Q9UH99 717 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 DNPEPQ9ULA0 475 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 NDRG2Q9UN36 371 aaKnown RBP9.77□□□□□ -0.85
CD46-214ENST00000480003 PLA2G4CQ9UP65 541 aa9.77□□□□□ -0.85
CD46-214ENST00000480003 PRR33A8MZF0 331 aa9.76□□□□□ -0.85
CD46-214ENST00000480003 CHURC1-FNTBB4DL54 471 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 429 ms