RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 RNF135Q8IUD6 432 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 GIMAP7Q8NHV1 300 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 ATXN2LQ8WWM7 1075 aaKnown RBP6.06□□□□□ -1.44
CPS1-207ENST00000479988 ATG4AQ8WYN0 398 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 C8orf48Q96LL4 319 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 C9orf72Q96LT7 481 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 LPIN3Q9BQK8 851 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 NAT9Q9BTE0 207 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 SLC13A1Q9BZW2 595 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 TRABDQ9H4I3 376 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 ACP6Q9NPH0 428 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 SFMBT1Q9UHJ3 866 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 PCDHB11Q9Y5F2 797 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 TMEM120BA0PK00 339 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 JCHAINP01591 159 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 PABPC1P11940 636 aaKnown RBP6.06□□□□□ -1.44
CPS1-207ENST00000479988 DRD1P21728 446 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 TGM2P21980 687 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 PTPN7P35236 360 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 PHEXP78562 749 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 ILF3Q12906 894 aaKnown RBP eCLIP6.06□□□□□ -1.44
CPS1-207ENST00000479988 TRIP4Q15650 581 aaPredicted RBP6.06□□□□□ -1.44
CPS1-207ENST00000479988 CLLU1OSQ5K130 101 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 RAET1GQ6H3X3 334 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 LRRC49Q8IUZ0 686 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 ACTL9Q8TC94 416 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 TMEM40Q8WWA1 233 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 MSANTD3Q96H12 275 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 CELF6Q96J87 481 aaKnown RBP6.06□□□□□ -1.44
CPS1-207ENST00000479988 ACE2Q9BYF1 805 aaPredicted RBP6.06□□□□□ -1.44
CPS1-207ENST00000479988 VRTNQ9H8Y1 702 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 XAB2Q9HCS7 855 aaKnown RBP6.06□□□□□ -1.44
CPS1-207ENST00000479988 CYLDQ9NQC7 956 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 SLC2A4RGQ9NR83 387 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 CHST7Q9NS84 486 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 CACNG4Q9UBN1 327 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 HEATR9A2RTY3 570 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 FPGTO14772 594 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 MDM4O15151 490 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 LIASO43766 372 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 DAB1O75553 588 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 STBD1O95210 358 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 ZWINTO95229 277 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 VNN1O95497 513 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 CHEK2O96017 543 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 OTUD4Q01804 1114 aaKnown RBP6.06□□□□□ -1.44
CPS1-207ENST00000479988 LONRF1Q17RB8 773 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 COLGALT2Q8IYK4 626 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 LRRC39Q96DD0 335 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 CFAP36Q96G28 342 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 ZNF212Q9UDV6 495 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 SPACA6W5XKT8 324 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 IGKV6-21A0A0C4DH24 114 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 CCT8L1PA6NM43 557 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 O00370 1275 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 CILPO75339 1184 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 TCEA3O75764 348 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 STAU1O95793 577 aaKnown RBP6.06□□□□□ -1.44
CPS1-207ENST00000479988 ELFN1P0C7U0 828 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 TACR2P21452 398 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 PBLDP30039 288 aaPredicted RBP6.06□□□□□ -1.44
CPS1-207ENST00000479988 CDH5P33151 784 aaPredicted RBP6.06□□□□□ -1.44
CPS1-207ENST00000479988 GRK3P35626 688 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 MATKP42679 507 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 ABL2P42684 1182 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 MMP13P45452 471 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 NR2C2P49116 596 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 ZNF143P52747 638 aaPredicted RBP6.06□□□□□ -1.44
CPS1-207ENST00000479988 SEC24CP53992 1094 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 RPL6Q02878 288 aaKnown RBP6.06□□□□□ -1.44
CPS1-207ENST00000479988 UPP1Q16831 310 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 UGP2Q16851 508 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 RTP2Q5QGT7 225 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 MFSD4BQ5TF39 518 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 LCLAT1Q6UWP7 414 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 SLC36A4Q6YBV0 504 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 RNF19BQ6ZMZ0 732 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 TCEAL8Q8IYN2 117 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 STK32AQ8WU08 396 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 OVCA2Q8WZ82 227 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 KLHL29Q96CT2 875 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 ZDHHC18Q9NUE0 388 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 GPATCH2LQ9NWQ4 482 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 ELOVL2Q9NXB9 296 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.06□□□□□ -1.44
CPS1-207ENST00000479988 PRRC2BQ5JSZ5 2229 aaKnown RBP6.06□□□□□ -1.44
CPS1-207ENST00000479988 hCG_1818297A0A087WSY0 165 aa6.05□□□□□ -1.44
CPS1-207ENST00000479988 DYRK3O43781 588 aa6.05□□□□□ -1.44
CPS1-207ENST00000479988 ZNF217O75362 1048 aa6.05□□□□□ -1.44
CPS1-207ENST00000479988 KDELR1P24390 212 aa6.05□□□□□ -1.44
CPS1-207ENST00000479988 DUSP3P51452 185 aaPredicted RBP6.05□□□□□ -1.44
CPS1-207ENST00000479988 SESN2P58004 480 aaPredicted RBP6.05□□□□□ -1.44
CPS1-207ENST00000479988 DMC1Q14565 340 aa6.05□□□□□ -1.44
CPS1-207ENST00000479988 GRIN2CQ14957 1233 aa6.05□□□□□ -1.44
CPS1-207ENST00000479988 MRNIPQ6NTE8 343 aa6.05□□□□□ -1.44
CPS1-207ENST00000479988 SPATA21Q7Z572 469 aa6.05□□□□□ -1.44
CPS1-207ENST00000479988 KBTBD6Q86V97 674 aa6.05□□□□□ -1.44
CPS1-207ENST00000479988 TRAPPC5Q8IUR0 188 aa6.05□□□□□ -1.44
CPS1-207ENST00000479988 ALLCQ8N6M5 410 aa6.05□□□□□ -1.44
CPS1-207ENST00000479988 EXT2Q93063 718 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms