RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 SIM2Q14190 667 aaPredicted RBP11.03□□□□□ -0.64
ATG4B-219ENST00000479941 TTC31Q49AM3 519 aaPredicted RBP11.03□□□□□ -0.64
ATG4B-219ENST00000479941 CARD16Q5EG05 197 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 FAM46CQ5VWP2 391 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 CEP68Q76N32 757 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 RCOR2Q8IZ40 523 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 STK40Q8N2I9 435 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 PQLC3Q8N755 202 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 OR2A12Q8NGT7 310 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 EXD1Q8NHP7 514 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.03□□□□□ -0.64
ATG4B-219ENST00000479941 RLN3Q8WXF3 142 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 NKD2Q969F2 451 aaPredicted RBP11.03□□□□□ -0.64
ATG4B-219ENST00000479941 RNF25Q96BH1 459 aaPredicted RBP11.03□□□□□ -0.64
ATG4B-219ENST00000479941 RBM41Q96IZ5 413 aaKnown RBP11.03□□□□□ -0.64
ATG4B-219ENST00000479941 ZNF599Q96NL3 588 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 FAM129BQ96TA1 746 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 SP110Q9HB58 689 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 PDFQ9HBH1 243 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 USP36Q9P275 1121 aaKnown RBP11.03□□□□□ -0.64
ATG4B-219ENST00000479941 UBA2Q9UBT2 640 aaPredicted RBP11.03□□□□□ -0.64
ATG4B-219ENST00000479941 TRIM10Q9UDY6 481 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 IPO11Q9UI26 975 aaKnown RBP11.03□□□□□ -0.64
ATG4B-219ENST00000479941 AMFRQ9UKV5 643 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 GUCA1BQ9UMX6 200 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 FCF1Q9Y324 198 aaKnown RBP11.03□□□□□ -0.64
ATG4B-219ENST00000479941 MFHAS1Q9Y4C4 1052 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 PCDHA3Q9Y5H8 950 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 ACTL7AQ9Y615 435 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 RIF1Q5UIP0 2472 aaKnown RBP11.03□□□□□ -0.64
ATG4B-219ENST00000479941 GPR179Q6PRD1 2367 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 IGHV1OR15-9A0A0B4J2B8 117 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 MIF4GDA9UHW6 222 aaKnown RBP11.02□□□□□ -0.65
ATG4B-219ENST00000479941 C1QTNF3-AMACRE9PGA6 284 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 BNIP3LO60238 219 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 TMCC1O94876 653 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 GSRP00390 522 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 IL1BP01584 269 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 IGLV3-19P01714 112 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 LMNAP02545 664 aaKnown RBP11.02□□□□□ -0.65
ATG4B-219ENST00000479941 PRNPP04156 253 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 MX2P20592 715 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 CTNNA2P26232 953 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 CHRNA3P32297 505 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 CDKN2BP42772 138 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 DNA2P51530 1060 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 TPMTP51580 245 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 RWDD2BP57060 319 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 COPS2P61201 443 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 RHOAP61586 193 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 SNRPD1P62314 119 aaKnown RBP11.02□□□□□ -0.65
ATG4B-219ENST00000479941 SRSF5Q13243 272 aaKnown RBP11.02□□□□□ -0.65
ATG4B-219ENST00000479941 TFDP2Q14188 446 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 RFTN1Q14699 578 aaPredicted RBP11.02□□□□□ -0.65
ATG4B-219ENST00000479941 CST6Q15828 149 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 TAZQ16635 292 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 SPDYCQ5MJ68 293 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 TMCO4Q5TGY1 634 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 SLC9A4Q6AI14 798 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 MFSD7Q6UXD7 560 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 SLC36A4Q6YBV0 504 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 LEKR1Q6ZMV7 388 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 DPY19L3Q6ZPD9 716 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 PRR23BQ6ZRT6 265 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 USP30Q70CQ3 517 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 PEX26Q7Z412 305 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 NT5DC3Q86UY8 548 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 KBTBD6Q86V97 674 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 CACUL1Q86Y37 369 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 MMAAQ8IVH4 418 aaKnown RBP11.02□□□□□ -0.65
ATG4B-219ENST00000479941 ATPAF2Q8N5M1 289 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 TMIEQ8NEW7 156 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 OR2AP1Q8NGE2 309 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 NSMCE1Q8WV22 266 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 KRT35Q92764 455 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 ZC3H10Q96K80 434 aaKnown RBP11.02□□□□□ -0.65
ATG4B-219ENST00000479941 HEPHQ9BQS7 1158 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 TNKS2Q9H2K2 1166 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 PABPC3Q9H361 631 aaKnown RBP11.02□□□□□ -0.65
ATG4B-219ENST00000479941 HECAQ9UBI9 543 aaPredicted RBP11.02□□□□□ -0.65
ATG4B-219ENST00000479941 RAB23Q9ULC3 237 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 PPM1HQ9ULR3 514 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 CYP8B1Q9UNU6 501 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 NCKAP1Q9Y2A7 1128 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 PPP2R2CQ9Y2T4 447 aa11.02□□□□□ -0.65
ATG4B-219ENST00000479941 ZNF292O60281 2723 aa11.01□□□□□ -0.65
ATG4B-219ENST00000479941 APOL1O14791 398 aa11.01□□□□□ -0.65
ATG4B-219ENST00000479941 MID1O15344 667 aa11.01□□□□□ -0.65
ATG4B-219ENST00000479941 MAP3K13O43283 966 aa11.01□□□□□ -0.65
ATG4B-219ENST00000479941 MFSD11O43934 449 aa11.01□□□□□ -0.65
ATG4B-219ENST00000479941 MAFKO60675 156 aa11.01□□□□□ -0.65
ATG4B-219ENST00000479941 RHOBTB1O94844 696 aa11.01□□□□□ -0.65
ATG4B-219ENST00000479941 IGSF6O95976 241 aa11.01□□□□□ -0.65
ATG4B-219ENST00000479941 C5AR1P21730 350 aa11.01□□□□□ -0.65
ATG4B-219ENST00000479941 CD6P30203 668 aa11.01□□□□□ -0.65
ATG4B-219ENST00000479941 SLC8A1P32418 973 aa11.01□□□□□ -0.65
ATG4B-219ENST00000479941 CETN2P41208 172 aa11.01□□□□□ -0.65
ATG4B-219ENST00000479941 GARSP41250 739 aaKnown RBP11.01□□□□□ -0.65
ATG4B-219ENST00000479941 PSMD8P48556 350 aa11.01□□□□□ -0.65
ATG4B-219ENST00000479941 MARCKSL1P49006 195 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms