RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	CCNL2	Q96S94	520 aa	Predicted RBP	16.01	■□□□□ 0.15
HDLBP-238	ENST00000479894	DNAJC7	Q99615	494 aa		16.01	■□□□□ 0.15
HDLBP-238	ENST00000479894	TRIM62	Q9BVG3	475 aa		16.01	■□□□□ 0.15
HDLBP-238	ENST00000479894	ABCG4	Q9H172	646 aa		16.01	■□□□□ 0.15
HDLBP-238	ENST00000479894	MTG2	Q9H4K7	406 aa		16.01	■□□□□ 0.15
HDLBP-238	ENST00000479894	LRRC4	Q9HBW1	653 aa		16.01	■□□□□ 0.15
HDLBP-238	ENST00000479894	OLA1	Q9NTK5	396 aa	Known RBP	16.01	■□□□□ 0.15
HDLBP-238	ENST00000479894	AJAP1	Q9UKB5	411 aa	Predicted RBP	16.01	■□□□□ 0.15
HDLBP-238	ENST00000479894	HBS1L	Q9Y450	684 aa	Known RBP	16.01	■□□□□ 0.15
HDLBP-238	ENST00000479894	NBPF19	A0A087WUL8	3843 aa		16.01	■□□□□ 0.15
HDLBP-238	ENST00000479894	NBAS	A2RRP1	2371 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	TBC1D3D	A0A087WVF3	549 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	TBC1D3I	A0A087WXS9	549 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	TBC1D3E	A0A087X179	549 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	TBC1D3K	A0A087X1G2	549 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	TBC1D3F	A6NER0	549 aa	Predicted RBP	16	■□□□□ 0.15
HDLBP-238	ENST00000479894	TBC1D3L	B9A6J9	549 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	RIOK3	O14730	519 aa	Known RBP	16	■□□□□ 0.15
HDLBP-238	ENST00000479894	NRDC	O43847	1150 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	MFAP3L	O75121	409 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	TBC1D3H	P0C7X1	549 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	ALPPL2	P10696	532 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	ITGB6	P18564	788 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	TNFAIP3	P21580	790 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	CD70	P32970	193 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	PPP2CB	P62714	309 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	PPP2CA	P67775	309 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	TBX2	Q13207	712 aa	Predicted RBP	16	■□□□□ 0.15
HDLBP-238	ENST00000479894	CLN3	Q13286	438 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	STAT4	Q14765	748 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	TBC1D3G	Q6DHY5	549 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	TBC1D3C	Q6IPX1	549 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	IRF2BP2	Q7Z5L9	587 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	TBC1D3	Q8IZP1	549 aa	Predicted RBP	16	■□□□□ 0.15
HDLBP-238	ENST00000479894	AADAT	Q8N5Z0	425 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	EPS8L1	Q8TE68	723 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	KCTD13	Q8WZ19	329 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	TFAP2B	Q92481	460 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	FAM131C	Q96AQ9	280 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	AGPAT1	Q99943	283 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	CYTH4	Q9UIA0	394 aa		16	■□□□□ 0.15
HDLBP-238	ENST00000479894	SPTBN1	Q01082	2364 aa	Known RBP	15.99	■□□□□ 0.15
HDLBP-238	ENST00000479894	SLC7A4	O43246	635 aa		15.99	■□□□□ 0.15
HDLBP-238	ENST00000479894	RNGTT	O60942	597 aa	Known RBP	15.99	■□□□□ 0.15
HDLBP-238	ENST00000479894	FBXO21	O94952	628 aa		15.99	■□□□□ 0.15
HDLBP-238	ENST00000479894	GIMD1	P0DJR0	217 aa		15.99	■□□□□ 0.15
HDLBP-238	ENST00000479894	YWHAG	P61981	247 aa	Known RBP eCLIP	15.99	■□□□□ 0.15
HDLBP-238	ENST00000479894	CDK17	Q00537	523 aa		15.99	■□□□□ 0.15
HDLBP-238	ENST00000479894	SIX6OS1	Q8N1H7	587 aa		15.99	■□□□□ 0.15
HDLBP-238	ENST00000479894	ARL14	Q8N4G2	192 aa		15.99	■□□□□ 0.15
HDLBP-238	ENST00000479894	KLHDC7B	Q96G42	594 aa		15.99	■□□□□ 0.15
HDLBP-238	ENST00000479894	PRR11	Q96HE9	360 aa	Predicted RBP	15.99	■□□□□ 0.15
HDLBP-238	ENST00000479894	LMLN	Q96KR4	655 aa		15.99	■□□□□ 0.15
HDLBP-238	ENST00000479894	MRGPRX3	Q96LB0	322 aa		15.99	■□□□□ 0.15
HDLBP-238	ENST00000479894	PANX2	Q96RD6	677 aa		15.99	■□□□□ 0.15
HDLBP-238	ENST00000479894	ARHGAP9	Q9BRR9	750 aa		15.99	■□□□□ 0.15
HDLBP-238	ENST00000479894	DUSP23	Q9BVJ7	150 aa		15.99	■□□□□ 0.15
HDLBP-238	ENST00000479894	SYNC	Q9H7C4	482 aa		15.99	■□□□□ 0.15
HDLBP-238	ENST00000479894	KLHL11	Q9NVR0	708 aa		15.99	■□□□□ 0.15
HDLBP-238	ENST00000479894	NLGN3	Q9NZ94	848 aa		15.99	■□□□□ 0.15
HDLBP-238	ENST00000479894	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	15.99	■□□□□ 0.15
HDLBP-238	ENST00000479894	CREBBP	Q92793	2442 aa		15.99	■□□□□ 0.15
HDLBP-238	ENST00000479894	TEP1	Q99973	2627 aa	Known RBP	15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	EDDM13	A0A1B0GTR0	161 aa		15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894		A0A1W2PNU3	283 aa	Predicted RBP	15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	PRAMEF26	H0Y7S4	382 aa		15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	IRAK2	O43187	625 aa		15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	SRPRA	P08240	638 aa	Known RBP	15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	GPD2	P43304	727 aa		15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	TDRD12	Q587J7	1177 aa	Known RBP	15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	RAB41	Q5JT25	222 aa		15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	NOP9	Q86U38	636 aa	Known RBP	15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	TRIM69	Q86WT6	500 aa		15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	ZDHHC17	Q8IUH5	632 aa		15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	SCML4	Q8N228	414 aa		15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	FIBIN	Q8TAL6	211 aa		15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	UBA3	Q8TBC4	463 aa		15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	WFDC5	Q8TCV5	224 aa		15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	MAPK15	Q8TD08	544 aa		15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	SLC35F5	Q8WV83	523 aa		15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	APOLD1	Q96LR9	279 aa		15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	FAM129B	Q96TA1	746 aa		15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	DEF6	Q9H4E7	631 aa		15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	ABHD10	Q9NUJ1	306 aa		15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	SEPT11	Q9NVA2	429 aa	Known RBP	15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	TMEM51	Q9NW97	253 aa		15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	NOCT	Q9UK39	431 aa	Known RBP	15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	ENTPD2	Q9Y5L3	495 aa		15.98	■□□□□ 0.15
HDLBP-238	ENST00000479894	LY6G6E	A0A0G2JKS1	128 aa		15.97	■□□□□ 0.15
HDLBP-238	ENST00000479894	NEMP2	A6NFY4	417 aa		15.97	■□□□□ 0.15
HDLBP-238	ENST00000479894	PIAS2	O75928	621 aa		15.97	■□□□□ 0.15
HDLBP-238	ENST00000479894	PNMA6A	P0CW24	399 aa	Predicted RBP	15.97	■□□□□ 0.15
HDLBP-238	ENST00000479894	GZMA	P12544	262 aa		15.97	■□□□□ 0.15
HDLBP-238	ENST00000479894	CDH5	P33151	784 aa	Predicted RBP	15.97	■□□□□ 0.15
HDLBP-238	ENST00000479894	CSK	P41240	450 aa		15.97	■□□□□ 0.15
HDLBP-238	ENST00000479894	NSF	P46459	744 aa	Known RBP	15.97	■□□□□ 0.15
HDLBP-238	ENST00000479894	PSMD8	P48556	350 aa		15.97	■□□□□ 0.15
HDLBP-238	ENST00000479894	NFKB2	Q00653	900 aa		15.97	■□□□□ 0.15
HDLBP-238	ENST00000479894	PIK3R6	Q5UE93	754 aa		15.97	■□□□□ 0.15

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