RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 TRIM67Q6ZTA4 783 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 SPNS2Q8IVW8 549 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 CHERPQ8IWX8 916 aaKnown RBP13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 ANKRD52Q8NB46 1076 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 OR6J1Q8NGC5 347 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 PCDHAC1Q9H158 963 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 ANLNQ9NQW6 1124 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 CIDEBQ9UHD4 219 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 ZDHHC2Q9UIJ5 367 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 ZNF638Q14966 1978 aaKnown RBP13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 GRID2O43424 1007 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 TRIM13O60858 407 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 CREB5Q02930 508 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 DCAF6Q58WW2 860 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 ARL13AQ5H913 290 aaPredicted RBP13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 NXNQ6DKJ4 435 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 SLC26A9Q7LBE3 791 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 RBM12BQ8IXT5 1001 aaKnown RBP13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 TSPAN14Q8NG11 270 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 OR52K1Q8NGK4 314 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 NPLOC4Q8TAT6 608 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 DNAJB3Q8WWF6 145 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 P2RY11Q96G91 374 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 CNDP1Q96KN2 507 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 RBBP8Q99708 897 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 COQ10BQ9H8M1 238 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 VTA1Q9NP79 307 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 EPS15L1Q9UBC2 864 aa13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 MRPL42Q9Y6G3 142 aaKnown RBP13.53□□□□□ -0.24
PDZRN3-208ENST00000479530 MEIS3P2A8K0S8 358 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 KPNA7A9QM74 516 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 TMEM233B4DJY2 109 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 FAM72CH0Y354 149 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 I6L893 689 aaPredicted RBP13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 PLOD2O00469 737 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 ATP6V1G1O75348 118 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 BCAS2O75934 225 aaPredicted RBP13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 C2P06681 752 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 MLNP12872 115 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 PSMC3P17980 439 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 ME2P23368 584 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 MAGEA12P43365 314 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 GLRBP48167 497 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 SERPINB8P50452 374 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 AFF1P51825 1210 aaKnown RBP13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 CDH15P55291 814 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 ADIGQ0VDE8 80 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 FAM72AQ5TYM5 149 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 FAM219BQ5XKK7 198 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 FAM72DQ6L9T8 149 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 ZFP1Q6P2D0 407 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 C4orf22Q6V702 233 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 DPP9Q86TI2 863 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 PIGZQ86VD9 579 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 FAM72BQ86X60 149 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 RP9Q8TA86 221 aaKnown RBP13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 EME1Q96AY2 570 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 SLC10A4Q96EP9 437 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 PRDM16Q9HAZ2 1276 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 NMRAL1Q9HBL8 299 aa13.52□□□□□ -0.24
PDZRN3-208ENST00000479530 RBM47A0AV96 593 aaKnown RBP13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 KCNK1O00180 336 aa13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 PIGNO95427 931 aa13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 CAPNS1P04632 268 aa13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 SBK3P0C264 359 aa13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 TFEBP19484 476 aa13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 SAT1P21673 171 aa13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 PTPN9P43378 593 aa13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 NDST2P52849 883 aa13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 BST2Q10589 180 aaKnown RBP13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 NME3Q13232 169 aa13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 FBXO47Q5MNV8 452 aa13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 ACBD5Q5T8D3 534 aaPredicted RBP13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 KIAA0319Q5VV43 1072 aa13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 ARHGAP17Q68EM7 881 aa13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 CLEC14AQ86T13 490 aa13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 PGAM4Q8N0Y7 254 aa13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 MYO1HQ8N1T3 1032 aa13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 BEST2Q8NFU1 509 aa13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 DIS3LQ8TF46 1054 aaKnown RBP13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 ZNF669Q96BR6 464 aaPredicted RBP13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 MFSD3Q96ES6 412 aa13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 SLC29A1Q99808 456 aa13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 CCT7Q99832 543 aa13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 ILKAPQ9H0C8 392 aaPredicted RBP13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 ZNF385DQ9H6B1 395 aa13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 RSL24D1Q9UHA3 163 aaKnown RBP13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 ZNF232Q9UNY5 417 aa13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 PIN4Q9Y237 131 aaKnown RBP13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 CITO14578 2027 aa13.52□□□□□ -0.25
PDZRN3-208ENST00000479530 PIRO00625 290 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 HDAC3O15379 428 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 POLBP06746 335 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 HNRNPCP07910 306 aaKnown RBP eCLIP13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 DESP17661 470 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 TPP2P29144 1249 aaPredicted RBP13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 PPARGP37231 505 aaPredicted RBP13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 GRIA4P48058 902 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 LPIN1Q14693 890 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 C9orf131Q5VYM1 1079 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms