RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 CAMK1GQ96NX5 476 aa19.16■□□□□ 0.66
SREBF1-212ENST00000478616 OMDQ99983 421 aa19.16■□□□□ 0.66
SREBF1-212ENST00000478616 FNDC3AQ9Y2H6 1198 aaKnown RBP19.16■□□□□ 0.66
SREBF1-212ENST00000478616 ARID1BQ8NFD5 2236 aaPredicted RBP19.16■□□□□ 0.66
SREBF1-212ENST00000478616 ACACBO00763 2458 aa19.15■□□□□ 0.66
SREBF1-212ENST00000478616 A0A1W2PR77 199 aa19.15■□□□□ 0.66
SREBF1-212ENST00000478616 BNIP3LO60238 219 aa19.15■□□□□ 0.66
SREBF1-212ENST00000478616 LRCH4O75427 683 aa19.15■□□□□ 0.66
SREBF1-212ENST00000478616 GNSP15586 552 aa19.15■□□□□ 0.66
SREBF1-212ENST00000478616 PSMA2P25787 234 aa19.15■□□□□ 0.66
SREBF1-212ENST00000478616 IL1R2P27930 398 aa19.15■□□□□ 0.66
SREBF1-212ENST00000478616 MIPP30301 263 aa19.15■□□□□ 0.66
SREBF1-212ENST00000478616 HNRNPH3P31942 346 aaKnown RBP19.15■□□□□ 0.66
SREBF1-212ENST00000478616 CASP14P31944 242 aa19.15■□□□□ 0.66
SREBF1-212ENST00000478616 GKP32189 559 aa19.15■□□□□ 0.66
SREBF1-212ENST00000478616 CHRNA3P32297 505 aa19.15■□□□□ 0.66
SREBF1-212ENST00000478616 NOVA1P51513 510 aaKnown RBP19.15■□□□□ 0.66
SREBF1-212ENST00000478616 CCR5P51681 352 aa19.15■□□□□ 0.66
SREBF1-212ENST00000478616 OR14C36Q8NHC7 312 aa19.15■□□□□ 0.66
SREBF1-212ENST00000478616 GANCQ8TET4 914 aa19.15■□□□□ 0.66
SREBF1-212ENST00000478616 ZNF653Q96CK0 615 aa19.15■□□□□ 0.66
SREBF1-212ENST00000478616 KCTD15Q96SI1 283 aaPredicted RBP19.15■□□□□ 0.66
SREBF1-212ENST00000478616 SNRNP25Q9BV90 132 aaKnown RBP19.15■□□□□ 0.66
SREBF1-212ENST00000478616 RETREG1Q9H6L5 497 aa19.15■□□□□ 0.66
SREBF1-212ENST00000478616 NCKAP1Q9Y2A7 1128 aa19.15■□□□□ 0.66
SREBF1-212ENST00000478616 SNX11Q9Y5W9 270 aa19.15■□□□□ 0.66
SREBF1-212ENST00000478616 CEP295Q9C0D2 2601 aa19.15■□□□□ 0.66
SREBF1-212ENST00000478616 AKAP13Q12802 2813 aa19.14■□□□□ 0.65
SREBF1-212ENST00000478616 GOLGA6L19H0YKK7 550 aa19.14■□□□□ 0.65
SREBF1-212ENST00000478616 KCNK3O14649 394 aa19.14■□□□□ 0.65
SREBF1-212ENST00000478616 TOP3BO95985 862 aaKnown RBP19.14■□□□□ 0.65
SREBF1-212ENST00000478616 HLA-BQ31612 363 aa19.14■□□□□ 0.65
SREBF1-212ENST00000478616 EFHC2Q5JST6 749 aa19.14■□□□□ 0.65
SREBF1-212ENST00000478616 TXNRD3NBQ6F5E7 133 aa19.14■□□□□ 0.65
SREBF1-212ENST00000478616 LRSAM1Q6UWE0 723 aa19.14■□□□□ 0.65
SREBF1-212ENST00000478616 CPNE8Q86YQ8 564 aa19.14■□□□□ 0.65
SREBF1-212ENST00000478616 TP53INP2Q8IXH6 220 aa19.14■□□□□ 0.65
SREBF1-212ENST00000478616 TMIEQ8NEW7 156 aa19.14■□□□□ 0.65
SREBF1-212ENST00000478616 HMCESQ96FZ2 354 aa19.14■□□□□ 0.65
SREBF1-212ENST00000478616 CEP44Q9C0F1 390 aa19.14■□□□□ 0.65
SREBF1-212ENST00000478616 MAGEH1Q9H213 219 aa19.14■□□□□ 0.65
SREBF1-212ENST00000478616 LRRC19Q9H756 370 aa19.14■□□□□ 0.65
SREBF1-212ENST00000478616 PCSK1NQ9UHG2 260 aa19.14■□□□□ 0.65
SREBF1-212ENST00000478616 AP4E1Q9UPM8 1137 aa19.14■□□□□ 0.65
SREBF1-212ENST00000478616 MAP1BP46821 2468 aaKnown RBP19.13■□□□□ 0.65
SREBF1-212ENST00000478616 CXorf51AA0A1B0GTR3 108 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 SPINT1O43278 529 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 KDELR3O43731 214 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 CREB3O43889 395 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 OPHN1O60890 802 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 CBFA2T3O75081 653 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 LEFTY1O75610 366 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 SERPING1P05155 500 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 SYPP08247 313 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 EPHB2P29323 1055 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 CTSKP43235 329 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 GRIA4P48058 902 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 AIF1P55008 147 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 SLC20A2Q08357 652 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 SHBQ15464 509 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 ASTE1Q2TB18 679 aaPredicted RBP19.13■□□□□ 0.65
SREBF1-212ENST00000478616 ARSIQ5FYB1 569 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 PPP1R2P3Q6NXS1 205 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 DBX2Q6ZNG2 339 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 UMODL1-AS1Q8N2C9 162 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 GRIN3AQ8TCU5 1115 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 BTBD6Q96KE9 485 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 THAP2Q9H0W7 228 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 CAAP1Q9H8G2 361 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 PDFQ9HBH1 243 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 MYO1AQ9UBC5 1043 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 MFHAS1Q9Y4C4 1052 aa19.13■□□□□ 0.65
SREBF1-212ENST00000478616 LRRC72A6NJI9 287 aa19.12■□□□□ 0.65
SREBF1-212ENST00000478616 RASA4BC9J798 803 aa19.12■□□□□ 0.65
SREBF1-212ENST00000478616 SLC7A4O43246 635 aa19.12■□□□□ 0.65
SREBF1-212ENST00000478616 RASA4O43374 803 aa19.12■□□□□ 0.65
SREBF1-212ENST00000478616 SH3BP5O60239 455 aa19.12■□□□□ 0.65
SREBF1-212ENST00000478616 RAMP2O60895 175 aa19.12■□□□□ 0.65
SREBF1-212ENST00000478616 CEACAM1P13688 526 aa19.12■□□□□ 0.65
SREBF1-212ENST00000478616 KCNA4P22459 653 aa19.12■□□□□ 0.65
SREBF1-212ENST00000478616 AFF3P51826 1226 aaKnown RBP19.12■□□□□ 0.65
SREBF1-212ENST00000478616 CCNHP51946 323 aaPredicted RBP19.12■□□□□ 0.65
SREBF1-212ENST00000478616 TPM4P67936 248 aa19.12■□□□□ 0.65
SREBF1-212ENST00000478616 POLD3Q15054 466 aaPredicted RBP19.12■□□□□ 0.65
SREBF1-212ENST00000478616 NFKBIBQ15653 356 aa19.12■□□□□ 0.65
SREBF1-212ENST00000478616 CARD16Q5EG05 197 aa19.12■□□□□ 0.65
SREBF1-212ENST00000478616 AFMIDQ63HM1 303 aa19.12■□□□□ 0.65
SREBF1-212ENST00000478616 RETSATQ6NUM9 610 aa19.12■□□□□ 0.65
SREBF1-212ENST00000478616 ARHGAP12Q8IWW6 846 aa19.12■□□□□ 0.65
SREBF1-212ENST00000478616 PCDH20Q8N6Y1 951 aaKnown RBP19.12■□□□□ 0.65
SREBF1-212ENST00000478616 NPWQ8N729 165 aa19.12■□□□□ 0.65
SREBF1-212ENST00000478616 RNF214Q8ND24 703 aa19.12■□□□□ 0.65
SREBF1-212ENST00000478616 OR6K2Q8NGY2 324 aa19.12■□□□□ 0.65
SREBF1-212ENST00000478616 TM6SF2Q9BZW4 377 aa19.12■□□□□ 0.65
SREBF1-212ENST00000478616 ZDHHC5Q9C0B5 715 aa19.12■□□□□ 0.65
SREBF1-212ENST00000478616 GAREM1Q9H706 876 aa19.12■□□□□ 0.65
SREBF1-212ENST00000478616 ZFR2Q9UPR6 939 aaKnown RBP19.12■□□□□ 0.65
SREBF1-212ENST00000478616 ANKRD6Q9Y2G4 727 aa19.12■□□□□ 0.65
SREBF1-212ENST00000478616 FRYQ5TBA9 3013 aa19.11■□□□□ 0.65
SREBF1-212ENST00000478616 SPAARA0A1B0GVQ0 90 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms