RNA–Protein interactions for RNA: ENST00000478541.1

CYTH3-206, Transcript of cytohesin 3, humanhuman

TSL 2

Gene CYTH3, Length 505 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-206ENST00000478541 ZNF252P-AS1Q0IIN9 211 aa16.34■□□□□ 0.21
CYTH3-206ENST00000478541 CNTN1Q12860 1018 aa16.34■□□□□ 0.21
CYTH3-206ENST00000478541 POLD3Q15054 466 aaPredicted RBP16.34■□□□□ 0.21
CYTH3-206ENST00000478541 TDRD12Q587J7 1177 aaKnown RBP16.34■□□□□ 0.21
CYTH3-206ENST00000478541 N4BP2L1Q5TBK1 243 aaPredicted RBP16.34■□□□□ 0.21
CYTH3-206ENST00000478541 AGBL4Q5VU57 503 aa16.34■□□□□ 0.21
CYTH3-206ENST00000478541 DNAAF5Q86Y56 855 aa16.34■□□□□ 0.21
CYTH3-206ENST00000478541 PLPP6Q8IY26 295 aa16.34■□□□□ 0.21
CYTH3-206ENST00000478541 RTL3Q8N8U3 475 aaKnown RBP16.34■□□□□ 0.21
CYTH3-206ENST00000478541 OR2I1PQ8NGU4 316 aa16.34■□□□□ 0.21
CYTH3-206ENST00000478541 ZNF653Q96CK0 615 aa16.34■□□□□ 0.21
CYTH3-206ENST00000478541 EIF3CQ99613 913 aaKnown RBP16.34■□□□□ 0.21
CYTH3-206ENST00000478541 SLC32A1Q9H598 525 aa16.34■□□□□ 0.21
CYTH3-206ENST00000478541 EBF2Q9HAK2 575 aa16.34■□□□□ 0.21
CYTH3-206ENST00000478541 MRPL47Q9HD33 250 aaKnown RBP16.34■□□□□ 0.21
CYTH3-206ENST00000478541 LUC7L2Q9Y383 392 aaKnown RBP16.34■□□□□ 0.21
CYTH3-206ENST00000478541 TBC1D3DA0A087WVF3 549 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 TBC1D3IA0A087WXS9 549 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 TBC1D3EA0A087X179 549 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 TBC1D3KA0A087X1G2 549 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 A0A1B0GVT2 93 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 TBC1D3FA6NER0 549 aaPredicted RBP16.33■□□□□ 0.2
CYTH3-206ENST00000478541 TBC1D3LB9A6J9 549 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 GIPC1O14908 333 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 FGF10O15520 208 aaPredicted RBP16.33■□□□□ 0.2
CYTH3-206ENST00000478541 GYPCP04921 128 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 TBC1D3HP0C7X1 549 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 KCNA4P22459 653 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 NUDT1P36639 197 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 RECQLP46063 649 aaPredicted RBP16.33■□□□□ 0.2
CYTH3-206ENST00000478541 YBEYP58557 167 aaPredicted RBP16.33■□□□□ 0.2
CYTH3-206ENST00000478541 CCDC15Q0P6D6 951 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 TBC1D3GQ6DHY5 549 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 TBC1D3CQ6IPX1 549 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 DPY19L3Q6ZPD9 716 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 VPS36Q86VN1 386 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 TBC1D3Q8IZP1 549 aaPredicted RBP16.33■□□□□ 0.2
CYTH3-206ENST00000478541 ARFGAP1Q8N6T3 406 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 CHST14Q8NCH0 376 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 NCAPGQ9BPX3 1015 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 XPO4Q9C0E2 1151 aaKnown RBP16.33■□□□□ 0.2
CYTH3-206ENST00000478541 TNKS2Q9H2K2 1166 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 CATSPERBQ9H7T0 1116 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 IL36AQ9UHA7 158 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 HPCAL4Q9UM19 191 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 AP4E1Q9UPM8 1137 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 ANKRD6Q9Y2G4 727 aa16.33■□□□□ 0.2
CYTH3-206ENST00000478541 ZSCAN5CA6NGD5 496 aaPredicted RBP16.32■□□□□ 0.2
CYTH3-206ENST00000478541 PLK4O00444 970 aa16.32■□□□□ 0.2
CYTH3-206ENST00000478541 KDELR3O43731 214 aa16.32■□□□□ 0.2
CYTH3-206ENST00000478541 CREB3O43889 395 aa16.32■□□□□ 0.2
CYTH3-206ENST00000478541 RNF8O76064 485 aa16.32■□□□□ 0.2
CYTH3-206ENST00000478541 PMLP29590 882 aa16.32■□□□□ 0.2
CYTH3-206ENST00000478541 HNRNPDQ14103 355 aaKnown RBP16.32■□□□□ 0.2
CYTH3-206ENST00000478541 ACAP1Q15027 740 aa16.32■□□□□ 0.2
CYTH3-206ENST00000478541 HLA-BQ31612 363 aa16.32■□□□□ 0.2
CYTH3-206ENST00000478541 CARD16Q5EG05 197 aa16.32■□□□□ 0.2
CYTH3-206ENST00000478541 ERMARDQ5T6L9 678 aa16.32■□□□□ 0.2
CYTH3-206ENST00000478541 PIP5KL1Q5T9C9 394 aa16.32■□□□□ 0.2
CYTH3-206ENST00000478541 TRIM69Q86WT6 500 aa16.32■□□□□ 0.2
CYTH3-206ENST00000478541 PSTKQ8IV42 348 aaKnown RBP16.32■□□□□ 0.2
CYTH3-206ENST00000478541 UMODL1-AS1Q8N2C9 162 aa16.32■□□□□ 0.2
CYTH3-206ENST00000478541 DEFB124Q8NES8 71 aa16.32■□□□□ 0.2
CYTH3-206ENST00000478541 CPLX3Q8WVH0 158 aa16.32■□□□□ 0.2
CYTH3-206ENST00000478541 PPP1R16AQ96I34 528 aa16.32■□□□□ 0.2
CYTH3-206ENST00000478541 NOL6Q9H6R4 1146 aaKnown RBP16.32■□□□□ 0.2
CYTH3-206ENST00000478541 GAREM1Q9H706 876 aa16.32■□□□□ 0.2
CYTH3-206ENST00000478541 PREBQ9HCU5 417 aa16.32■□□□□ 0.2
CYTH3-206ENST00000478541 DONSONQ9NYP3 566 aa16.32■□□□□ 0.2
CYTH3-206ENST00000478541 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.32■□□□□ 0.2
CYTH3-206ENST00000478541 WASF2Q9Y6W5 498 aa16.32■□□□□ 0.2
CYTH3-206ENST00000478541 PCNX2A6NKB5 2137 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 KPNA3O00505 521 aaPredicted RBP16.31■□□□□ 0.2
CYTH3-206ENST00000478541 VILLO15195 856 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 LRCH4O75427 683 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 HNRNPH3P31942 346 aaKnown RBP16.31■□□□□ 0.2
CYTH3-206ENST00000478541 CASP14P31944 242 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 CCNHP51946 323 aaPredicted RBP16.31■□□□□ 0.2
CYTH3-206ENST00000478541 TAS2R38P59533 333 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 PPP2CBP62714 309 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 PPP2CAP67775 309 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 NFKBIBQ15653 356 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 KIF19Q2TAC6 998 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 PARP15Q460N3 678 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 ARSIQ5FYB1 569 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 NEK5Q6P3R8 708 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 DBX2Q6ZNG2 339 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 CASKIN2Q8WXE0 1202 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 ARRDC3Q96B67 414 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 LRIG1Q96JA1 1093 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 SLC6A18Q96N87 628 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 PEBP4Q96S96 227 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 HEPHQ9BQS7 1158 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.31■□□□□ 0.2
CYTH3-206ENST00000478541 HDAC8Q9BY41 377 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 TRIM7Q9C029 511 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 TSPY26PQ9H489 355 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 DYRK4Q9NR20 520 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 ARHGAP20Q9P2F6 1191 aa16.31■□□□□ 0.2
CYTH3-206ENST00000478541 DMTF1Q9Y222 760 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms