RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 METAP1P53582 386 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 GEMIN4P57678 1058 aaKnown RBP7.03□□□□□ -1.28
BRCA1-215ENST00000478531 YBEYP58557 167 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-215ENST00000478531 RPS14P62263 151 aaKnown RBP7.03□□□□□ -1.28
BRCA1-215ENST00000478531 KIF5AQ12840 1032 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 BYSLQ13895 437 aaKnown RBP7.03□□□□□ -1.28
BRCA1-215ENST00000478531 PDK2Q15119 407 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 TCEAL1Q15170 157 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 ELF2Q15723 593 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 CST6Q15828 149 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 ANKRD20A8PQ5CZ79 823 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 C11orf63Q6NUN7 778 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 ASCL5Q7RTU5 278 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 MAP7D3Q8IWC1 876 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 LRRC8AQ8IWT6 810 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 ARHGAP12Q8IWW6 846 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 TP53INP2Q8IXH6 220 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 RHOT1Q8IXI2 618 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 TMEFF1Q8IYR6 380 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 TXLNBQ8N3L3 684 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 RYBPQ8N488 228 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-215ENST00000478531 OR6K2Q8NGY2 324 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 TPCN2Q8NHX9 752 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 OR8D1Q8WZ84 308 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 RAPGEF5Q92565 580 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 TSC1Q92574 1164 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 EXOC2Q96KP1 924 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 CCDC114Q96M63 670 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 ZNF670Q9BS34 389 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 RSPH9Q9H1X1 276 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-215ENST00000478531 ZDHHC6Q9H6R6 413 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 SP110Q9HB58 689 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 NCDNQ9UBB6 729 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 MBD1Q9UIS9 605 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-215ENST00000478531 ALG6Q9Y672 507 aa7.03□□□□□ -1.28
BRCA1-215ENST00000478531 ATXN2Q99700 1313 aaKnown RBP7.03□□□□□ -1.28
BRCA1-215ENST00000478531 IGHV1OR15-9A0A0B4J2B8 117 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 A0A1W2PP55 124 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 ZSCAN5CA6NGD5 496 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 PROB1E7EW31 1015 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 J3KR12 359 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 PLK4O00444 970 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 PSTPIP1O43586 416 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 NRDCO43847 1150 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 NDUFS2O75306 463 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 RNASEH2AO75792 299 aaKnown RBP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 CD160O95971 181 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 KDELR1P24390 212 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 MARCKSL1P49006 195 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 DHPSP49366 369 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 ARSEP51690 589 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 CLCN6P51797 869 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 HADHBP55084 474 aaKnown RBP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 DYNLT1P63172 113 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 LLGL1Q15334 1064 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 PLK5Q496M5 336 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 ATXN7L2Q5T6C5 722 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 DPY19L3Q6ZPD9 716 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 DSG4Q86SJ6 1040 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 CCDC50Q8IVM0 306 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 ATPAF2Q8N5M1 289 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 PCDH20Q8N6Y1 951 aaKnown RBP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 SUMF1Q8NBK3 374 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 CHST14Q8NCH0 376 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 KNL1Q8NG31 2342 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 OR2A12Q8NGT7 310 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 PCDH19Q8TAB3 1148 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 RNF25Q96BH1 459 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 TOE1Q96GM8 510 aaKnown RBP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 FAM129BQ96TA1 746 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 OMDQ99983 421 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 DUSP15Q9H1R2 295 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 PABPC3Q9H361 631 aaKnown RBP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 SEMA4AQ9H3S1 761 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 USP36Q9P275 1121 aaKnown RBP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 RCOR3Q9P2K3 495 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 UBA2Q9UBT2 640 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 SERGEFQ9UGK8 458 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 GMEB2Q9UKD1 530 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 SARDHQ9UL12 918 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 ADGRG1Q9Y653 693 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 DCHS1Q96JQ0 3298 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 ADAMTS9Q9P2N4 1935 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 CACNA1EQ15878 2313 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 PLXNA2O75051 1894 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 GRID2IPA4D2P6 1211 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 FAM47DPA6NHR8 397 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 BTNL10A8MVZ5 291 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 C1QTNF3-AMACRE9PGA6 284 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 KPNA3O00505 521 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 PJA2O43164 708 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 PRAMEF11O60813 436 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 ZNF821O75541 412 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 RHOBTB1O94844 696 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 ADH1BP00325 375 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 CTSLP07711 333 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 PYGBP11216 843 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 IL4RP24394 825 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 CD6P30203 668 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms