RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 PPM1HQ9ULR3 514 aa4.34□□□□□ -1.71
POLR2B-208ENST00000478188 PKD1L2Q7Z442 2459 aa4.34□□□□□ -1.71
POLR2B-208ENST00000478188 SYNJ2BP-COX16A0A087WUM0 186 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 EDDM13A0A1B0GTR0 161 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 PRR5-ARHGAP8B1AHC4 643 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 K7ERQ8 282 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 PES1O00541 588 aaKnown RBP4.34□□□□□ -1.72
POLR2B-208ENST00000478188 ALOX15BO15296 676 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 LATO43561 262 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 ZNF217O75362 1048 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 PEX11BO96011 259 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 NTRK1P04629 796 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 EPHX1P07099 455 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 KRT3P12035 628 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 RHOQP17081 205 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 POLR2EP19388 210 aaKnown RBP4.34□□□□□ -1.72
POLR2B-208ENST00000478188 ABCB4P21439 1286 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 L1CAMP32004 1257 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 ACSL1P33121 698 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 ACVRL1P37023 503 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 NSFP46459 744 aaKnown RBP4.34□□□□□ -1.72
POLR2B-208ENST00000478188 AIF1P55008 147 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 SNX16P57768 344 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 ARHGAP8P85298 464 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 LMNB2Q03252 620 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 CBLBQ13191 982 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 KRTAP21-3Q3LHN1 58 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 FNDC3BQ53EP0 1204 aaKnown RBP4.34□□□□□ -1.72
POLR2B-208ENST00000478188 KCNT1Q5JUK3 1230 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 PIP5KL1Q5T9C9 394 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 TXNRD3NBQ6F5E7 133 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 SLC36A4Q6YBV0 504 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 DBX2Q6ZNG2 339 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 KANSL1Q7Z3B3 1105 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 GAS2L3Q86XJ1 694 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 TMPRSS6Q8IU80 811 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 ANKRD20A12PQ8NF67 263 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 OR7D4Q8NG98 312 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 OR2A12Q8NGT7 310 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 ARRDC3Q96B67 414 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 TOE1Q96GM8 510 aaKnown RBP4.34□□□□□ -1.72
POLR2B-208ENST00000478188 UCN2Q96RP3 112 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 CIPCQ9C0C6 399 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 C6orf106Q9H6K1 298 aaPredicted RBP4.34□□□□□ -1.72
POLR2B-208ENST00000478188 COX16Q9P0S2 106 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 NCDNQ9UBB6 729 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 LHX3Q9UBR4 397 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 ATXN2Q99700 1313 aaKnown RBP4.34□□□□□ -1.72
POLR2B-208ENST00000478188 ZFHX4Q86UP3 3567 aa4.34□□□□□ -1.72
POLR2B-208ENST00000478188 A0A1W2PR77 199 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 TSPAN11A1L157 253 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 METTL12A8MUP2 240 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 WNT9AO14904 365 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 PLRG1O43660 514 aaKnown RBP4.33□□□□□ -1.72
POLR2B-208ENST00000478188 MTA2O94776 668 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 DKK1O94907 266 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 LCA5LO95447 670 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 WNT1P04628 370 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 SERPING1P05155 500 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 PROS1P07225 676 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 TPM2P07951 284 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 CDK11BP21127 795 aaKnown RBP4.33□□□□□ -1.72
POLR2B-208ENST00000478188 IL4RP24394 825 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 CASP14P31944 242 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 MAPKAPK2P49137 400 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 SERPINH1P50454 418 aaKnown RBP4.33□□□□□ -1.72
POLR2B-208ENST00000478188 UBASH3AP57075 661 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 RNASE9P60153 205 aaKnown RBP4.33□□□□□ -1.72
POLR2B-208ENST00000478188 ATP11AP98196 1134 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 ARID5AQ03989 594 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 CDH18Q13634 790 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 SHBQ15464 509 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 CST6Q15828 149 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 DAB2IPQ5VWQ8 1189 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 RNF219Q5W0B1 726 aaPredicted RBP4.33□□□□□ -1.72
POLR2B-208ENST00000478188 DNAJC24Q6P3W2 148 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 C22orf39Q6P5X5 142 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 CEP68Q76N32 757 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 SYT12Q8IV01 421 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 UMODL1-AS1Q8N2C9 162 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 STK40Q8N2I9 435 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 NPWQ8N729 165 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 RTL3Q8N8U3 475 aaKnown RBP4.33□□□□□ -1.72
POLR2B-208ENST00000478188 CHST14Q8NCH0 376 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 UCMAQ8WVF2 138 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 NANOS1Q8WY41 292 aaKnown RBP4.33□□□□□ -1.72
POLR2B-208ENST00000478188 IQCDQ96DY2 449 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 RPL10LQ96L21 214 aaKnown RBP4.33□□□□□ -1.72
POLR2B-208ENST00000478188 RPRD1AQ96P16 312 aaPredicted RBP4.33□□□□□ -1.72
POLR2B-208ENST00000478188 SNRNP25Q9BV90 132 aaKnown RBP4.33□□□□□ -1.72
POLR2B-208ENST00000478188 NUP58Q9BVL2 599 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 PACSIN1Q9BY11 444 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 ZYG11BQ9C0D3 744 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 FSCN3Q9NQT6 498 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 DNAAF2Q9NVR5 837 aaKnown RBP4.33□□□□□ -1.72
POLR2B-208ENST00000478188 FZD4Q9ULV1 537 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 DOLKQ9UPQ8 538 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 MFHAS1Q9Y4C4 1052 aa4.33□□□□□ -1.72
POLR2B-208ENST00000478188 H0Y626 953 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms