RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 DCAF17Q5H9S7 520 aaPredicted RBP6.04□□□□□ -1.44
TRA2B-211ENST00000477939 ANKRD20A2Q5SQ80 823 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 ANKRD20A1Q5TYW2 823 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 ANKRD20A3Q5VUR7 823 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 SHEQ5VZ18 495 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 KRT79Q5XKE5 535 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 PDPK2PQ6A1A2 396 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 WDR93Q6P2C0 686 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 C4orf22Q6V702 233 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 DTHD1Q6ZMT9 781 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 TPRG1Q6ZUI0 275 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 UNC13DQ70J99 1090 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 CCNJLQ8IV13 435 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 TCEAL8Q8IYN2 117 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 TERB1Q8NA31 727 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 TMEM161BQ8NDZ6 487 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 ZNF461Q8TAF7 563 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 FNDC8Q8TC99 324 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 LRRC15Q8TF66 581 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 JPH3Q8WXH2 748 aaPredicted RBP6.04□□□□□ -1.44
TRA2B-211ENST00000477939 SHC3Q92529 594 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 TCEAL4Q96EI5 215 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 SHDQ96IW2 340 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 SUSD3Q96L08 255 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 RUNDC3BQ96NL0 473 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 NOX5Q96PH1 765 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 PNMA5Q96PV4 448 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 BBS4Q96RK4 519 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 PLA2G2FQ9BZM2 168 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 TGIF2Q9GZN2 237 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 OR51B5Q9H339 312 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 XKR8Q9H6D3 395 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 C17orf75Q9HAS0 396 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 LTB4R2Q9NPC1 389 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 GIN1Q9NXP7 522 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 NKIRAS2Q9NYR9 191 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 GDE1Q9NZC3 331 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 SENP1Q9P0U3 644 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.04□□□□□ -1.44
TRA2B-211ENST00000477939 RPL26L1Q9UNX3 145 aaKnown RBP6.04□□□□□ -1.44
TRA2B-211ENST00000477939 SPEF1Q9Y4P9 236 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 INSL5Q9Y5Q6 135 aa6.04□□□□□ -1.44
TRA2B-211ENST00000477939 LAMA1P25391 3075 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 SCN1AP35498 2009 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 NUP210Q8TEM1 1887 aaPredicted RBP6.03□□□□□ -1.44
TRA2B-211ENST00000477939 KIF26AQ9ULI4 1882 aaPredicted RBP6.03□□□□□ -1.44
TRA2B-211ENST00000477939 NPHP3-ACAD11A0A0J9YXS1 232 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 TTC26A0AVF1 554 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 CTAGE9A4FU28 777 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 VWA3AA6NCI4 1184 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 SLC9B1P1A6NJY1 282 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 ACOD1A6NK06 481 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 E9PBE3 544 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 FAM189A1O60320 539 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 MOSPD3O75425 235 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 VNN2O95498 520 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 CNOT4O95628 575 aaKnown RBP6.03□□□□□ -1.44
TRA2B-211ENST00000477939 ESRRBO95718 433 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 FAM107AO95990 144 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 LRG1P02750 347 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 C7P10643 843 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 KRT5P13647 590 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 ZNF12P17014 697 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 TYK2P29597 1187 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 PPARGP37231 505 aaPredicted RBP6.03□□□□□ -1.44
TRA2B-211ENST00000477939 TNFSF9P41273 254 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 ID4P47928 161 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 GSSP48637 474 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 RAP1GDS1P52306 607 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 HNRNPFP52597 415 aaKnown RBP6.03□□□□□ -1.44
TRA2B-211ENST00000477939 HADHBP55084 474 aaKnown RBP6.03□□□□□ -1.44
TRA2B-211ENST00000477939 ARPP19P56211 112 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 UBE2HP62256 183 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 GNGT1P63211 74 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 UBE2IP63279 158 aaKnown RBP6.03□□□□□ -1.44
TRA2B-211ENST00000477939 COG7P83436 770 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 CYP4F8P98187 520 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 OTUD4Q01804 1114 aaKnown RBP6.03□□□□□ -1.44
TRA2B-211ENST00000477939 PPP2R3AQ06190 1150 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 MCL1Q07820 350 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 CDC20Q12834 499 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 CSTF3Q12996 717 aaKnown RBP6.03□□□□□ -1.44
TRA2B-211ENST00000477939 STRN3Q13033 797 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 GRM2Q14416 872 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 PLA2G4EQ3MJ16 856 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 ACCSLQ4AC99 568 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 CTXN3Q4LDR2 81 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 TMEM119Q4V9L6 283 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 TTMPQ5BVD1 217 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 FAM78AQ5JUQ0 283 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 BTBD8Q5XKL5 378 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 TPGS2Q68CL5 300 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 TANGO2Q6ICL3 276 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 ZC3H14Q6PJT7 736 aaKnown RBP6.03□□□□□ -1.44
TRA2B-211ENST00000477939 ZPBP2Q6X784 338 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 Q6ZNX1 250 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 PRR23CQ6ZRP0 262 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 CYP4V2Q6ZWL3 525 aaPredicted RBP6.03□□□□□ -1.44
TRA2B-211ENST00000477939 TRPM8Q7Z2W7 1104 aa6.03□□□□□ -1.44
TRA2B-211ENST00000477939 DNAAF5Q86Y56 855 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms