RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 FBXO47Q5MNV8 452 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 OR52E8Q6IFG1 317 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 NOTUMQ6P988 496 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 NET1Q7Z628 596 aaPredicted RBP9.92□□□□□ -0.82
CMC1-209ENST00000477739 DSELQ8IZU8 1212 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 KYQ8NBH2 561 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 MZB1Q8WU39 189 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 CCDC90BQ9GZT6 254 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 TKTL2Q9H0I9 626 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 PDP2Q9P2J9 529 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 GNEQ9Y223 722 aaKnown RBP9.92□□□□□ -0.82
CMC1-209ENST00000477739 CDYLQ9Y232 598 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 SSC5DA1L4H1 1573 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 MDM4O15151 490 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 AHCYL1O43865 530 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 OR4Q2P0C623 313 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 PTPN1P18031 435 aaKnown RBP9.92□□□□□ -0.82
CMC1-209ENST00000477739 CHRM3P20309 590 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 GRIA3P42263 894 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 GSSP48637 474 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 PLCL1Q15111 1095 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 FAM83EQ2M2I3 478 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 SGO1Q5FBB7 561 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 ESRP1Q6NXG1 681 aaKnown RBP9.92□□□□□ -0.82
CMC1-209ENST00000477739 ZNF276Q8N554 614 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 PPTC7Q8NI37 304 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 BLOC1S5Q8TDH9 187 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 GORASP1Q9BQQ3 440 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 VTA1Q9NP79 307 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 PIGVQ9NUD9 493 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 ZDHHC2Q9UIJ5 367 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 NUP214P35658 2090 aaPredicted RBP9.92□□□□□ -0.82
CMC1-209ENST00000477739 YJEFN3A6XGL0 299 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 E7ENQ6 273 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 H3BSA7 217 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 BDNFP23560 247 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 YWHAQP27348 245 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 NCBP2-AS2Q69YL0 99 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 SLC27A1Q6PCB7 646 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 MAVSQ7Z434 540 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 ARHGAP22Q7Z5H3 698 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 LRTOMTQ8WZ04 291 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 SERPINI1Q99574 410 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 SPON2Q9BUD6 331 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 POMKQ9H5K3 350 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 WDCPQ9H6R7 721 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 CYLDQ9NQC7 956 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 CDY2AQ9Y6F7 541 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 CDY1Q9Y6F8 540 aa9.92□□□□□ -0.82
CMC1-209ENST00000477739 COL11A1P12107 1806 aaPredicted RBP9.91□□□□□ -0.82
CMC1-209ENST00000477739 DNAJC25-GNG10A0A024R161 153 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 NRP1O14786 923 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 HNRNPCL1O60812 293 aaKnown RBP9.91□□□□□ -0.82
CMC1-209ENST00000477739 SPAG6O75602 509 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 B3GAT3O94766 335 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 CRHR1P34998 444 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 GGT5P36269 586 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 SERPINB9P50453 376 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 PSMD7P51665 324 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 YWHAHQ04917 246 aaPredicted RBP9.91□□□□□ -0.82
CMC1-209ENST00000477739 SLC18A2Q05940 514 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 TLR1Q15399 786 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 DCAF4L1Q3SXM0 396 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 MBLAC2Q68D91 279 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 FBXL19Q6PCT2 694 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 OLFML1Q6UWY5 402 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 ENDOVQ8N8Q3 282 aaKnown RBP9.91□□□□□ -0.82
CMC1-209ENST00000477739 EZH1Q92800 747 aaPredicted RBP9.91□□□□□ -0.82
CMC1-209ENST00000477739 GAD1Q99259 594 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 ALG9Q9H6U8 611 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 FAM50BQ9Y247 325 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 ARHGEF37A1IGU5 675 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 A8MX80 341 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 XPOTO43592 962 aaKnown RBP9.91□□□□□ -0.82
CMC1-209ENST00000477739 GFAPP14136 432 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 MS4A2Q01362 244 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 C16orf72Q14CZ0 275 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 CPNE9Q8IYJ1 553 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 DNAJB14Q8TBM8 379 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 TMIGD2Q96BF3 282 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 CNDP1Q96KN2 507 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 PKP2Q99959 881 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 ARMC7Q9H6L4 198 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 DDX43Q9NXZ2 648 aaKnown RBP9.91□□□□□ -0.82
CMC1-209ENST00000477739 EPS15L1Q9UBC2 864 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 WARS2Q9UGM6 360 aaKnown RBP9.91□□□□□ -0.82
CMC1-209ENST00000477739 DCDC2Q9UHG0 476 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 EMCNQ9ULC0 261 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 STAP1Q9ULZ2 295 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 GIPC1O14908 333 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 ITGB6P18564 788 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 TFEBP19484 476 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 CYP2B6P20813 491 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 GABRB2P47870 512 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 ATP1A4Q13733 1029 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 NADK2Q4G0N4 442 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 CIR1Q86X95 450 aaPredicted RBP9.91□□□□□ -0.82
CMC1-209ENST00000477739 GALNT15Q8N3T1 639 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 FAM110BQ8TC76 370 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 CCDC106Q9BWC9 280 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms