RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	CD58	P19256	250 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	POU3F3	P20264	500 aa	Predicted RBP	4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	WARS	P23381	471 aa	Known RBP	4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	OR1D2	P34982	312 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	FNTB	P49356	437 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	AARS	P49588	968 aa	Known RBP eCLIP	4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	COPB1	P53618	953 aa	Known RBP	4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	UBASH3A	P57075	661 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SLC6A3	Q01959	620 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PPP3CA	Q08209	521 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	RAPGEF1	Q13905	1077 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	TRIM14	Q14142	442 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PTPN14	Q15678	1187 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	MGAT5B	Q3V5L5	792 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ATAT1	Q5SQI0	421 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	WSCD1	Q658N2	575 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PCSK4	Q6UW60	755 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PRSS55	Q6UWB4	352 aa	Predicted RBP	4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CYP26C1	Q6V0L0	522 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SCARA5	Q6ZMJ2	495 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289		Q6ZPA2	131 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289		Q6ZRM9	215 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289		Q7L0L9	218 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	LUZP1	Q86V48	1076 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PALB2	Q86YC2	1186 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	DRC7	Q8IY82	874 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	LILRB2	Q8N423	598 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	MSANTD4	Q8NCY6	345 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	OR5AN1	Q8NGI8	311 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ZNF461	Q8TAF7	563 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	LNX1	Q8TBB1	728 aa	Predicted RBP	4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	TAS1R2	Q8TE23	839 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	NKD2	Q969F2	451 aa	Predicted RBP	4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	JAKMIP2	Q96AA8	810 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ZNF512	Q96ME7	567 aa	Predicted RBP	4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	RIPOR3	Q96MK2	946 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CLUHP3	Q96NS8	147 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	KLHL5	Q96PQ7	755 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SYT15	Q9BQS2	421 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PAAF1	Q9BRP4	392 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	NUP58	Q9BVL2	599 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	TRIM5	Q9C035	493 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	INTS2	Q9H0H0	1204 aa	Known RBP	4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	TTYH1	Q9H313	450 aa	Predicted RBP	4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SFXN1	Q9H9B4	322 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CYP4F11	Q9HBI6	524 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	UBE2T	Q9NPD8	197 aa	Predicted RBP	4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SLC2A4RG	Q9NR83	387 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ZNHIT6	Q9NWK9	470 aa	Known RBP	4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	MARCH5	Q9NX47	278 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ZDHHC7	Q9NXF8	308 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SAE1	Q9UBE0	346 aa	Predicted RBP	4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	MTRR	Q9UBK8	725 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	LIMA1	Q9UHB6	759 aa	Known RBP	4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	FBXL5	Q9UKA1	691 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	KIAA1257	Q9ULG3	409 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	BARX2	Q9UMQ3	279 aa	Predicted RBP	4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	STXBP5L	Q9Y2K9	1186 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	COQ4	Q9Y3A0	265 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	MTCH2	Q9Y6C9	303 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CDY1	Q9Y6F8	540 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	RALGAPA2	Q2PPJ7	1873 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	LGALS16	A8MUM7	142 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ZNF197	O14709	1029 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PPEF2	O14830	753 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PER2	O15055	1255 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	TEX28	O15482	410 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	H2AFY	O75367	372 aa	Known RBP	4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	KRT37	O76014	449 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ADH4	P08319	380 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CNP	P09543	421 aa	Known RBP	4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PDGFRB	P09619	1106 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	WEE2	P0C1S8	567 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	VDR	P11473	427 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	KRT4	P19013	534 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	MAK	P20794	623 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	LMO1	P25800	156 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	KRT9	P35527	623 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	STAT1	P42224	750 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	MTHFR	P42898	656 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	KIF11	P52732	1056 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	NDST1	P52848	882 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SESN2	P58004	480 aa	Predicted RBP	4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	GCNT1	Q02742	428 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ITIH3	Q06033	890 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ADCY1	Q08828	1119 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	GPR17	Q13304	367 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CUL2	Q13617	745 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	KRT31	Q15323	416 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	DUSP6	Q16828	381 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ARHGAP44	Q17R89	818 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CBWD6	Q4V339	395 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PABPC1L	Q4VXU2	614 aa	Known RBP	4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SLC39A12	Q504Y0	691 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ARHGAP15	Q53QZ3	475 aa		4.74	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	C2orf27A	Q580R0	203 aa		4.74	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms