RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 PMM2O15305 246 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 GNA14O95837 355 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 LTFP02788 710 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 SLC2A3P11169 496 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 ABCB4P21439 1286 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 HLA-FP30511 346 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 ARRB1P49407 418 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-214ENST00000477152 CSNK1EP49674 416 aaKnown RBP7.51□□□□□ -1.21
BRCA1-214ENST00000477152 DAOAP59103 153 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 KIAA0895LQ68EN5 471 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 TMEM270Q6UE05 265 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 SHISA2Q6UWI4 295 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 DBX2Q6ZNG2 339 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 KIAA0907Q7Z7F0 614 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-214ENST00000477152 FMR1NBQ8N0W7 255 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-214ENST00000477152 FIBINQ8TAL6 211 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 HNRNPLLQ8WVV9 542 aaKnown RBP7.51□□□□□ -1.21
BRCA1-214ENST00000477152 SEMA4DQ92854 862 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 DHTKD1Q96HY7 919 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-214ENST00000477152 CAMK1GQ96NX5 476 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 MED15Q96RN5 788 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 TM9SF3Q9HD45 589 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 TJP2Q9UDY2 1190 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 SFMBT1Q9UHJ3 866 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 FZD4Q9ULV1 537 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 EDDM13A0A1B0GTR0 161 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 PRAMEF27A3QJZ7 478 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 M0QYV0 167 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 O00370 1275 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 VILLO15195 856 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 PAPSS1O43252 624 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-214ENST00000477152 CBFA2T3O75081 653 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 ITGAVP06756 1048 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 HLA-EP13747 358 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 RPS14P62263 151 aaKnown RBP7.5□□□□□ -1.21
BRCA1-214ENST00000477152 FAM193AP78312 1265 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 PIK3R6Q5UE93 754 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 FAM46CQ5VWP2 391 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 BEND5Q7L4P6 421 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 PRPF39Q86UA1 669 aaKnown RBP7.5□□□□□ -1.21
BRCA1-214ENST00000477152 TMPRSS12Q86WS5 348 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 PPM1KQ8N3J5 372 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 CARNMT1Q8N4J0 409 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 ATP6V0D2Q8N8Y2 350 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 OR2T34Q8NGX1 318 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 UBA3Q8TBC4 463 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 CYB5D2Q8WUJ1 264 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 TTC17Q96AE7 1141 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 RSPH9Q9H1X1 276 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-214ENST00000477152 PABPC3Q9H361 631 aaKnown RBP7.5□□□□□ -1.21
BRCA1-214ENST00000477152 PRSS16Q9NQE7 514 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 FBXL12Q9NXK8 326 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 PCDHGA1Q9Y5H4 931 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 USP24Q9UPU5 2620 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 ADAMTS20P59510 1910 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 FAM208BQ5VWN6 2430 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 YJEFN3A6XGL0 299 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 E7ENQ6 273 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 SMAD7O15105 426 aaKnown RBP7.5□□□□□ -1.21
BRCA1-214ENST00000477152 DNAJA2O60884 412 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 DRD2P14416 443 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 C5AR1P21730 350 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 ACSL1P33121 698 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 PRCPP42785 496 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 FMO5P49326 533 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 CCR5P51681 352 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 BECN1Q14457 450 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 MEA1Q16626 185 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 KIF19Q2TAC6 998 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 HNRNPA1L2Q32P51 320 aaKnown RBP7.5□□□□□ -1.21
BRCA1-214ENST00000477152 RABGAP1LQ5R372 815 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 ENOSF1Q7L5Y1 443 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 ADIPOR2Q86V24 386 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 CACUL1Q86Y37 369 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 PNPLA1Q8N8W4 532 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 RBBP8NLQ8NC74 664 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-214ENST00000477152 SORCS1Q8WY21 1168 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 FAM149B1Q96BN6 582 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 BIRC7Q96CA5 298 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 NXPE2Q96DL1 559 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 CCDC114Q96M63 670 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 TIGD1Q96MW7 591 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 NOX5Q96PH1 765 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 C6orf106Q9H6K1 298 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-214ENST00000477152 CD93Q9NPY3 652 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 GDF3Q9NR23 364 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 AASDHPPTQ9NRN7 309 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 SNX11Q9Y5W9 270 aa7.5□□□□□ -1.21
BRCA1-214ENST00000477152 PTPRBP23467 1997 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 A0A1W2PPC4 97 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 FAM47DPA6NHR8 397 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 F5H5T6 163 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 SLC7A4O43246 635 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 RNASEH2AO75792 299 aaKnown RBP7.49□□□□□ -1.21
BRCA1-214ENST00000477152 LUC7L3O95232 432 aaKnown RBP7.49□□□□□ -1.21
BRCA1-214ENST00000477152 LDOC1O95751 146 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-214ENST00000477152 IGLV3-27P01718 113 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 LORP23490 312 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-214ENST00000477152 CD38P28907 300 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 ZNF165P49910 485 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms