RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, human

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKS1B-206	ENST00000474215	DNAAF5	Q86Y56	855 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	PCDH20	Q8N6Y1	951 aa	Known RBP	11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	CHST14	Q8NCH0	376 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	CPLX3	Q8WVH0	158 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	IQCD	Q96DY2	449 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	TRIM11	Q96F44	468 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	EPAS1	Q99814	870 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	ISCU	Q9H1K1	167 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	EBF2	Q9HAK2	575 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	IL21R	Q9HBE5	538 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	IFNK	Q9P0W0	207 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	CNOT8	Q9UFF9	292 aa	Known RBP	11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	SNX11	Q9Y5W9	270 aa		11.42	□□□□□ -0.58
CKS1B-206	ENST00000474215	KPNA3	O00505	521 aa	Predicted RBP	11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	VILL	O15195	856 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	ATMIN	O43313	823 aa	Predicted RBP	11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	LAT	O43561	262 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	PLRG1	O43660	514 aa	Known RBP	11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	KDELR3	O43731	214 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	CREB3	O43889	395 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	SH3BP5	O60239	455 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	RNF8	O76064	485 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	SERPING1	P05155	500 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	ZNF883	P0CG24	379 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	MYBL1	P10243	752 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	PSMA2	P25787	234 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	PML	P29590	882 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	ZNF252P-AS1	Q0IIN9	211 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	HNRNPD	Q14103	355 aa	Known RBP	11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	CARD16	Q5EG05	197 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	ARSI	Q5FYB1	569 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	AGBL4	Q5VU57	503 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	ADAT2	Q7Z6V5	191 aa	Known RBP	11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	PLPP6	Q8IY26	295 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	ARFGAP1	Q8N6T3	406 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	RTL3	Q8N8U3	475 aa	Known RBP	11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	ISG20	Q96AZ6	181 aa	Known RBP	11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	SKA1	Q96BD8	255 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	ZNF653	Q96CK0	615 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	MRPL47	Q9HD33	250 aa	Known RBP	11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	DYRK4	Q9NR20	520 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	TM7SF3	Q9NS93	570 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	IL36A	Q9UHA7	158 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	LUC7L2	Q9Y383	392 aa	Known RBP	11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	SCIN	Q9Y6U3	715 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	PI4KA	P42356	2102 aa		11.41	□□□□□ -0.58
CKS1B-206	ENST00000474215	SPTBN2	O15020	2390 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	WASH4P	A8MWX3	477 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	EIF3CL	B5ME19	914 aa	Known RBP	11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	KCNK3	O14649	394 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	WNT9A	O14904	365 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	FGF10	O15520	208 aa	Predicted RBP	11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	LEFTY1	O75610	366 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	TPM3	P06753	285 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	HTR7	P34969	479 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	NUDT1	P36639	197 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	C21orf59	P57076	290 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	YBEY	P58557	167 aa	Predicted RBP	11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	TAS2R38	P59533	333 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	PPP2CB	P62714	309 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	PPP2CA	P67775	309 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	TDRD12	Q587J7	1177 aa	Known RBP	11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	KCNT1	Q5JUK3	1230 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	ERMARD	Q5T6L9	678 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	PIP5KL1	Q5T9C9	394 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	LAYN	Q6UX15	382 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	PRPF39	Q86UA1	669 aa	Known RBP	11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	VPS36	Q86VN1	386 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	TRIM69	Q86WT6	500 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	UMODL1-AS1	Q8N2C9	162 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	GRIN3A	Q8TCU5	1115 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	FNIP1	Q8TF40	1166 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	ARRDC3	Q96B67	414 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	PPP1R16A	Q96I34	528 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	SERAC1	Q96JX3	654 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	SLC6A18	Q96N87	628 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	CAMK1G	Q96NX5	476 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	EIF3C	Q99613	913 aa	Known RBP	11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	NCAPG	Q9BPX3	1015 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	HEPH	Q9BQS7	1158 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	HDAC8	Q9BY41	377 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	TRIM7	Q9C029	511 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	NOL6	Q9H6R4	1146 aa	Known RBP	11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	CATSPERB	Q9H7T0	1116 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	PREB	Q9HCU5	417 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	AASDHPPT	Q9NRN7	309 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	ARHGAP20	Q9P2F6	1191 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	MYO1A	Q9UBC5	1043 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	HECA	Q9UBI9	543 aa	Predicted RBP	11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	PCSK1N	Q9UHG2	260 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	ANGPTL2	Q9UKU9	493 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	FNDC3A	Q9Y2H6	1198 aa	Known RBP	11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	FCF1	Q9Y324	198 aa	Known RBP	11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	PCDHGB2	Q9Y5G2	931 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	ACTL7A	Q9Y615	435 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	WASF2	Q9Y6W5	498 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	ADAMTS9	Q9P2N4	1935 aa		11.4	□□□□□ -0.58
CKS1B-206	ENST00000474215	NUMA1	Q14980	2115 aa		11.39	□□□□□ -0.59
CKS1B-206	ENST00000474215	SPAAR	A0A1B0GVQ0	90 aa		11.39	□□□□□ -0.59

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