RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 EIF2B4Q9UI10 523 aaKnown RBP14.51□□□□□ -0.09
VAMP4-203ENST00000474047 FZD4Q9ULV1 537 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 SLC6A14Q9UN76 642 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 NEU3Q9UQ49 428 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 FCF1Q9Y324 198 aaKnown RBP14.51□□□□□ -0.09
VAMP4-203ENST00000474047 WASH4PA8MWX3 477 aa14.5□□□□□ -0.09
VAMP4-203ENST00000474047 RASA4BC9J798 803 aa14.5□□□□□ -0.09
VAMP4-203ENST00000474047 KPNA3O00505 521 aaPredicted RBP14.5□□□□□ -0.09
VAMP4-203ENST00000474047 RASA4O43374 803 aa14.5□□□□□ -0.09
VAMP4-203ENST00000474047 PRNPP04156 253 aa14.5□□□□□ -0.09
VAMP4-203ENST00000474047 SERPINF2P08697 491 aa14.5□□□□□ -0.09
VAMP4-203ENST00000474047 C7P10643 843 aa14.5□□□□□ -0.09
VAMP4-203ENST00000474047 CARD16Q5EG05 197 aa14.5□□□□□ -0.09
VAMP4-203ENST00000474047 SLC23A3Q6PIS1 610 aa14.5□□□□□ -0.09
VAMP4-203ENST00000474047 OR2A12Q8NGT7 310 aa14.5□□□□□ -0.09
VAMP4-203ENST00000474047 PACSIN1Q9BY11 444 aa14.5□□□□□ -0.09
VAMP4-203ENST00000474047 SERGEFQ9UGK8 458 aa14.5□□□□□ -0.09
VAMP4-203ENST00000474047 IL36AQ9UHA7 158 aa14.5□□□□□ -0.09
VAMP4-203ENST00000474047 LCMT1Q9UIC8 334 aa14.5□□□□□ -0.09
VAMP4-203ENST00000474047 PPM1HQ9ULR3 514 aa14.5□□□□□ -0.09
VAMP4-203ENST00000474047 TBC1D3DA0A087WVF3 549 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 TBC1D3IA0A087WXS9 549 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 TBC1D3EA0A087X179 549 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 TBC1D3KA0A087X1G2 549 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 CXorf51AA0A1B0GTR3 108 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 LNP1A1A4G5 178 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 TBC1D3FA6NER0 549 aaPredicted RBP14.49□□□□□ -0.09
VAMP4-203ENST00000474047 ARHGAP42A6NI28 874 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 TMEM110-MUSTN1A8MSY1 372 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 TBC1D3LB9A6J9 549 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 TMEM253P0C7T8 217 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 TBC1D3HP0C7X1 549 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 KRT81Q14533 505 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 ASTE1Q2TB18 679 aaPredicted RBP14.49□□□□□ -0.09
VAMP4-203ENST00000474047 ZFYVE27Q5T4F4 411 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 STPG1Q5TH74 334 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 KIAA0895LQ68EN5 471 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 TBC1D3GQ6DHY5 549 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 TBC1D3CQ6IPX1 549 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 TBC1D3Q8IZP1 549 aaPredicted RBP14.49□□□□□ -0.09
VAMP4-203ENST00000474047 UMODL1-AS1Q8N2C9 162 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 ZCCHC9Q8N567 271 aaKnown RBP14.49□□□□□ -0.09
VAMP4-203ENST00000474047 AADATQ8N5Z0 425 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 NIPA2Q8N8Q9 360 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 OR2T34Q8NGX1 318 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 GRIN3AQ8TCU5 1115 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 HMCESQ96FZ2 354 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 MRFAP1L1Q96HT8 127 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 RTKNQ9BST9 563 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 GTPBP2Q9BX10 602 aaKnown RBP14.49□□□□□ -0.09
VAMP4-203ENST00000474047 TM6SF2Q9BZW4 377 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 TMEM9BQ9NQ34 198 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 RXFP3Q9NSD7 469 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.49□□□□□ -0.09
VAMP4-203ENST00000474047 SARDHQ9UL12 918 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 NENFQ9UMX5 172 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 NUMA1Q14980 2115 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 A0A1B0GTW7 788 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 PLK4O00444 970 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 BCAT2O15382 392 aaPredicted RBP14.49□□□□□ -0.09
VAMP4-203ENST00000474047 SYPP08247 313 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 RARAP10276 462 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 ERCC2P18074 760 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 GJC1P36383 396 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 MAPK8P45983 427 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 HCAR3P49019 387 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 NDST2P52849 883 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 SNRPD1P62314 119 aaKnown RBP14.49□□□□□ -0.09
VAMP4-203ENST00000474047 ARSIQ5FYB1 569 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 PEAR1Q5VY43 1037 aaPredicted RBP14.49□□□□□ -0.09
VAMP4-203ENST00000474047 NCEH1Q6PIU2 408 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 DPY19L3Q6ZPD9 716 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 GAS2L3Q86XJ1 694 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 CHST14Q8NCH0 376 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 TMIEQ8NEW7 156 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 DNASE2BQ8WZ79 361 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 ISG20Q96AZ6 181 aaKnown RBP14.49□□□□□ -0.09
VAMP4-203ENST00000474047 BIRC7Q96CA5 298 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 PPP1R16AQ96I34 528 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 CELF6Q96J87 481 aaKnown RBP14.49□□□□□ -0.09
VAMP4-203ENST00000474047 HEPHQ9BQS7 1158 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 CWC15Q9P013 229 aaKnown RBP14.49□□□□□ -0.09
VAMP4-203ENST00000474047 HECAQ9UBI9 543 aaPredicted RBP14.49□□□□□ -0.09
VAMP4-203ENST00000474047 ACTL7AQ9Y615 435 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 FRYLO94915 3013 aa14.49□□□□□ -0.09
VAMP4-203ENST00000474047 TNRC6BQ9UPQ9 1833 aaKnown RBP14.48□□□□□ -0.09
VAMP4-203ENST00000474047 NYNRINQ9P2P1 1898 aaKnown RBP14.48□□□□□ -0.09
VAMP4-203ENST00000474047 DFFAO00273 331 aa14.48□□□□□ -0.09
VAMP4-203ENST00000474047 SLC30A4O14863 429 aa14.48□□□□□ -0.09
VAMP4-203ENST00000474047 IL1R2P27930 398 aa14.48□□□□□ -0.09
VAMP4-203ENST00000474047 PI4KAP42356 2102 aa14.48□□□□□ -0.09
VAMP4-203ENST00000474047 RAD51Q06609 339 aa14.48□□□□□ -0.09
VAMP4-203ENST00000474047 CNTN1Q12860 1018 aa14.48□□□□□ -0.09
VAMP4-203ENST00000474047 SERINC3Q13530 473 aa14.48□□□□□ -0.09
VAMP4-203ENST00000474047 UAP1L1Q3KQV9 507 aa14.48□□□□□ -0.09
VAMP4-203ENST00000474047 CYP4V2Q6ZWL3 525 aaPredicted RBP14.48□□□□□ -0.09
VAMP4-203ENST00000474047 DGLUCYQ7Z3D6 616 aa14.48□□□□□ -0.09
VAMP4-203ENST00000474047 TC2NQ8N9U0 490 aa14.48□□□□□ -0.09
VAMP4-203ENST00000474047 SLC35G2Q8TBE7 412 aa14.48□□□□□ -0.09
VAMP4-203ENST00000474047 TEKT4Q8WW24 435 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms