RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 AP3B1O00203 1094 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 EEF2KO00418 725 aaKnown RBP6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 PIRO00625 290 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 COPEO14579 308 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 CHUKO15111 745 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 NCAM2O15394 837 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 PAPSS1O43252 624 aaPredicted RBP6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 OPHN1O60890 802 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 SPAG7O75391 227 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 GCATO75600 419 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 F9P00740 461 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 SNRPAP09012 282 aaKnown RBP6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 CD48P09326 243 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 PDGFRBP09619 1106 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 MLNP12872 115 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 KRT4P19013 534 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 PCSK1P29120 753 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 LRPAP1P30533 357 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 SERPINB6P35237 376 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 ELK3P41970 407 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 SKIV2L2P42285 1042 aaKnown RBP6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 MATKP42679 507 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 RAB27AP51159 221 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 YWHAZP63104 245 aaKnown RBP6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 COG7P83436 770 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 KCNJ11Q14654 390 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 ZBTB6Q15916 424 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 FSCN1Q16658 493 aaKnown RBP6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 KCTD19Q17RG1 926 aaPredicted RBP6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 SOWAHAQ2M3V2 549 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 SLC25A52Q3SY17 297 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 TIGD5Q53EQ6 642 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 FAM133BQ5BKY9 247 aaKnown RBP6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 GLRA4Q5JXX5 417 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 FNBP1LQ5T0N5 605 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 MFSD14CQ5VZR4 134 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 ATG16L1Q676U5 607 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 SLC9A4Q6AI14 798 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 PMF1Q6P1K2 205 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 CYB5D1Q6P9G0 228 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 LVRNQ6Q4G3 990 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 DSTYKQ6XUX3 929 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 PRUNE1Q86TP1 453 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 TTC30AQ86WT1 665 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 LRRC6Q86X45 466 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 CILP2Q8IUL8 1156 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 SUGP1Q8IWZ8 645 aaKnown RBP6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 C4orf33Q8N1A6 199 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 TAB3Q8N5C8 712 aaPredicted RBP6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 ARFGAP1Q8N6T3 406 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 GLIS1Q8NBF1 620 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 B3GALNT2Q8NCR0 500 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 ZNF398Q8TD17 642 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 SLC2A14Q8TDB8 520 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 DNAJB3Q8WWF6 145 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 LINC01599Q8WXQ3 324 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 C18orf25Q96B23 403 aaPredicted RBP6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 KLHL29Q96CT2 875 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 TCTN2Q96GX1 697 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 APOPT1Q96IL0 206 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 QKIQ96PU8 341 aaKnown RBP eCLIP6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 LRRC37BQ96QE4 947 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 PEBP4Q96S96 227 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 HNRNPABQ99729 332 aaKnown RBP6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 TACO1Q9BSH4 297 aaKnown RBP6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 MTG1Q9BT17 334 aaPredicted RBP6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 EIF2AQ9BY44 585 aaKnown RBP6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 DUSP16Q9BY84 665 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 TRIM55Q9BYV6 548 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 BRD8Q9H0E9 1235 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 VPS11Q9H270 941 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 R3HDMLQ9H3Y0 253 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 ECT2Q9H8V3 914 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 MLXIPLQ9NP71 852 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 PNPLA8Q9NP80 782 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 EIF2B3Q9NR50 452 aaKnown RBP6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 CHST12Q9NRB3 414 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 ETNK2Q9NVF9 386 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 TXNDC16Q9P2K2 825 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 SAE1Q9UBE0 346 aaPredicted RBP6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 EBF1Q9UH73 591 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 ZNF180Q9UJW8 692 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 DSEQ9UL01 958 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 ZMYND8Q9ULU4 1186 aaPredicted RBP6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 PHTF1Q9UMS5 762 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 SLC12A4Q9UP95 1085 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 TRPV2Q9Y5S1 764 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 MAD1L1Q9Y6D9 718 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 ZNF236Q9UL36 1845 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 CYB561D2O14569 222 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 TNPO2O14787 897 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 PSMD3O43242 534 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 TMEM63AO94886 807 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 ASMTLO95671 621 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 OAS1P00973 400 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 APOEP02649 317 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 ATP5BP06576 529 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 APRTP07741 180 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 PFKMP08237 780 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 SRGAP2BP0DMP2 458 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms