RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 UBXN2AP68543 259 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 TEFQ10587 303 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 CALCOCO2Q13137 446 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 SNX17Q15036 470 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 HLFQ16534 295 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 TDRD12Q587J7 1177 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 MIIPQ5JXC2 388 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 SLC10A5Q5PT55 438 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 RARS2Q5T160 578 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 ATAD3BQ5T9A4 648 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 IYDQ6PHW0 289 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 RRAGAQ7L523 313 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 SLFN11Q7Z7L1 901 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 PCGF5Q86SE9 256 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 AMIGO2Q86SJ2 522 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 CCDC25Q86WR0 208 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 SHISA5Q8N114 240 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 PPM1KQ8N3J5 372 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 FAM109AQ8N4B1 249 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 DAGLBQ8NCG7 672 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 LHFPL5Q8TAF8 219 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 ART4Q93070 314 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 TP53INP1Q96A56 240 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 MAP6Q96JE9 813 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 CNOT6LQ96LI5 555 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 NLRP4Q96MN2 994 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 CDK5RAP1Q96SZ6 601 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 CDRT15Q96T59 188 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 SLC2A11Q9BYW1 496 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 MTMR12Q9C0I1 747 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 C7orf69Q9H7B7 122 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 C14orf93Q9H972 538 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 SLCO1B3Q9NPD5 702 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 CD93Q9NPY3 652 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 HOMER2Q9NSB8 354 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 SEPT11Q9NVA2 429 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 EMC3Q9P0I2 261 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 CEP72Q9P209 647 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 APPL1Q9UKG1 709 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 ST14Q9Y5Y6 855 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 KDM3AQ9Y4C1 1321 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 H0YJX3 145 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 hCG_2039718K7EN88 272 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 TNPO2O14787 897 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 NCAM2O15394 837 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 FOXP2O15409 715 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 ASNA1O43681 348 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 FGF18O76093 207 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 SNRPAP09012 282 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 PRKAR1BP31321 381 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 CHRNA3P32297 505 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 RPL9P32969 192 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 ARL1P40616 181 aaPredicted RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 CHRNA4P43681 627 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 ALDH1A3P47895 512 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 ALDH18A1P54886 795 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 NPEPPSP55786 919 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 EVA1CP58658 441 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 MRPS9P82933 396 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 KLHL30Q0D2K2 578 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 SP140Q13342 867 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 SELPLGQ14242 412 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 ZNF846Q147U1 533 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 EARS2Q5JPH6 523 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 ZNF618Q5T7W0 954 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 RNASEH2BQ5TBB1 312 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 PLEKHA7Q6IQ23 1121 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 CRTC3Q6UUV7 619 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 LINC00299Q6ZSB3 139 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 USP49Q70CQ1 688 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 USP53Q70EK8 1073 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 IGFN1Q86VF2 1251 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 SRRM1Q8IYB3 904 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 CLYBLQ8N0X4 340 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 TCAIMQ8N3R3 496 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 MFSD4AQ8N468 514 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 SLC15A4Q8N697 577 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 SLC22A8Q8TCC7 542 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 EAF2Q96CJ1 260 aaPredicted RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 OMA1Q96E52 524 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 ZNF347Q96SE7 839 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 MYD88Q99836 296 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 TRIT1Q9H3H1 467 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 DPEP3Q9H4B8 488 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 FAM207AQ9NSI2 230 aaPredicted RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 GIMAP4Q9NUV9 329 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 MRPL39Q9NYK5 338 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 SNX24Q9Y343 169 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 ZHX2Q9Y6X8 837 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 A0A0A6YYK5 440 aaPredicted RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 HMX2A2RU54 273 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 CAPN8A6NHC0 703 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 A8MX80 341 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 FAM25AB3EWG3 89 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 FAM25CB3EWG5 89 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 FAM25GB3EWG6 89 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 AURKAO14965 403 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 DYRK3O43781 588 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 COBLO75128 1261 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms