RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 POU4F2Q12837 409 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 BYSLQ13895 437 aaKnown RBP9.39□□□□□ -0.91
SMC4-213ENST00000472282 ARL13BQ3SXY8 428 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 MS4A13Q5J8X5 152 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 SPDYCQ5MJ68 293 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 SLC36A4Q6YBV0 504 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 CHST9Q7L1S5 443 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 KIAA0907Q7Z7F0 614 aaPredicted RBP9.39□□□□□ -0.91
SMC4-213ENST00000472282 ADIPOR2Q86V24 386 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 TMPRSS6Q8IU80 811 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 ARFGAP1Q8N6T3 406 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 BEND7Q8N7W2 519 aaPredicted RBP9.39□□□□□ -0.91
SMC4-213ENST00000472282 HJURPQ8NCD3 748 aaPredicted RBP9.39□□□□□ -0.91
SMC4-213ENST00000472282 DEFB124Q8NES8 71 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 RFFLQ8WZ73 363 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 NTAN1Q96AB6 310 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 TMA16Q96EY4 203 aaKnown RBP9.39□□□□□ -0.91
SMC4-213ENST00000472282 PRMT1Q99873 361 aaKnown RBP9.39□□□□□ -0.91
SMC4-213ENST00000472282 DESI2Q9BSY9 194 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 SLC2A11Q9BYW1 496 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 MTG2Q9H4K7 406 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 PRDM16Q9HAZ2 1276 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 CAPN10Q9HC96 672 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 LUC7LQ9NQ29 371 aaKnown RBP9.39□□□□□ -0.91
SMC4-213ENST00000472282 ABCB8Q9NUT2 735 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 TMEM51Q9NW97 253 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 STIM2Q9P246 746 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 USP36Q9P275 1121 aaKnown RBP9.39□□□□□ -0.91
SMC4-213ENST00000472282 IP6K2Q9UHH9 426 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 VANGL2Q9ULK5 521 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 REXO2Q9Y3B8 237 aaKnown RBP9.39□□□□□ -0.91
SMC4-213ENST00000472282 PCDHA13Q9Y5I0 950 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 PTPRBP23467 1997 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 ANKRD36A6QL64 1941 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 CACNA1EQ15878 2313 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 TMEM110-MUSTN1A8MSY1 372 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 MYO1FO00160 1098 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 ZNF217O75362 1048 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 LRCH4O75427 683 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 KRT37O76014 449 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 EPHX1P07099 455 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 SPINK2P20155 84 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 CD6P30203 668 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 MIPP30301 263 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 ADRA1BP35368 520 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 TPMTP51580 245 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 IRAK1P51617 712 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 CCZ1BP86790 482 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 CCZ1P86791 482 aaPredicted RBP9.38□□□□□ -0.91
SMC4-213ENST00000472282 MTA1Q13330 715 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 AUHQ13825 339 aaKnown RBP9.38□□□□□ -0.91
SMC4-213ENST00000472282 PIGHQ14442 188 aaPredicted RBP9.38□□□□□ -0.91
SMC4-213ENST00000472282 EIF4HQ15056 248 aaKnown RBP9.38□□□□□ -0.91
SMC4-213ENST00000472282 RABGAP1LQ5R372 815 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 FBXL22Q6P050 247 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 SERPINA13PQ6UXR4 307 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 SLFN11Q7Z7L1 901 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 C14orf80Q86SX3 495 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 KIAA1328Q86T90 577 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 CIR1Q86X95 450 aaPredicted RBP9.38□□□□□ -0.91
SMC4-213ENST00000472282 CPNE8Q86YQ8 564 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 LRRC8AQ8IWT6 810 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 RHOT2Q8IXI1 618 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 CFAP52Q8N1V2 620 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMC4-213ENST00000472282 NIPA2Q8N8Q9 360 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 CCDC112Q8NEF3 446 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 SLC35G2Q8TBE7 412 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 UCMAQ8WVF2 138 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 GTPBP3Q969Y2 492 aaKnown RBP9.38□□□□□ -0.91
SMC4-213ENST00000472282 TOE1Q96GM8 510 aaKnown RBP9.38□□□□□ -0.91
SMC4-213ENST00000472282 MYO19Q96H55 970 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 ZNF419Q96HQ0 510 aaPredicted RBP9.38□□□□□ -0.91
SMC4-213ENST00000472282 PDLIM2Q96JY6 352 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 LMLNQ96KR4 655 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 RPRD1AQ96P16 312 aaPredicted RBP9.38□□□□□ -0.91
SMC4-213ENST00000472282 PEBP4Q96S96 227 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 GPR174Q9BXC1 333 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 NUSAP1Q9BXS6 441 aaKnown RBP9.38□□□□□ -0.91
SMC4-213ENST00000472282 MAGEB5Q9BZ81 275 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 GRIP2Q9C0E4 1043 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 TMEM245Q9H330 911 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 ITM2CQ9NQX7 267 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 GPATCH2LQ9NWQ4 482 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 WSB2Q9NYS7 404 aaPredicted RBP9.38□□□□□ -0.91
SMC4-213ENST00000472282 PCSK1NQ9UHG2 260 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 GGA2Q9UJY4 613 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 INTS6Q9UL03 887 aaKnown RBP9.38□□□□□ -0.91
SMC4-213ENST00000472282 SLC6A14Q9UN76 642 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 PCDHB11Q9Y5F2 797 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 SLCO1B1Q9Y6L6 691 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 PLXNB3Q9ULL4 1909 aa9.38□□□□□ -0.91
SMC4-213ENST00000472282 LAMA1P25391 3075 aa9.37□□□□□ -0.91
SMC4-213ENST00000472282 A0A1B0GVM2 712 aa9.37□□□□□ -0.91
SMC4-213ENST00000472282 TCAF2A6NFQ2 919 aa9.37□□□□□ -0.91
SMC4-213ENST00000472282 E9PAM4 449 aa9.37□□□□□ -0.91
SMC4-213ENST00000472282 ARHGAP6O43182 974 aa9.37□□□□□ -0.91
SMC4-213ENST00000472282 PRPSAP2O60256 369 aa9.37□□□□□ -0.91
SMC4-213ENST00000472282 NDUFS2O75306 463 aa9.37□□□□□ -0.91
SMC4-213ENST00000472282 MTA2O94776 668 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms