RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 PCDH20Q8N6Y1 951 aaKnown RBP12.55□□□□□ -0.4
PRKCB-205ENST00000472066 PRSS33Q8NF86 280 aa12.55□□□□□ -0.4
PRKCB-205ENST00000472066 MDGA1Q8NFP4 955 aa12.55□□□□□ -0.4
PRKCB-205ENST00000472066 OR2A12Q8NGT7 310 aa12.55□□□□□ -0.4
PRKCB-205ENST00000472066 HMGB4Q8WW32 186 aa12.55□□□□□ -0.4
PRKCB-205ENST00000472066 NELL1Q92832 810 aa12.55□□□□□ -0.4
PRKCB-205ENST00000472066 MRGPRX1Q96LB2 322 aa12.55□□□□□ -0.4
PRKCB-205ENST00000472066 ZNF599Q96NL3 588 aa12.55□□□□□ -0.4
PRKCB-205ENST00000472066 TSGA13Q96PP4 275 aa12.55□□□□□ -0.4
PRKCB-205ENST00000472066 FAM129BQ96TA1 746 aa12.55□□□□□ -0.4
PRKCB-205ENST00000472066 HERPUD2Q9BSE4 406 aa12.55□□□□□ -0.4
PRKCB-205ENST00000472066 TLR10Q9BXR5 811 aa12.55□□□□□ -0.4
PRKCB-205ENST00000472066 FAM126AQ9BYI3 521 aaPredicted RBP12.55□□□□□ -0.4
PRKCB-205ENST00000472066 MKRN2Q9H000 416 aaKnown RBP12.55□□□□□ -0.4
PRKCB-205ENST00000472066 SLC6A17Q9H1V8 727 aa12.55□□□□□ -0.4
PRKCB-205ENST00000472066 RSPH9Q9H1X1 276 aaPredicted RBP12.55□□□□□ -0.4
PRKCB-205ENST00000472066 TNKS2Q9H2K2 1166 aa12.55□□□□□ -0.4
PRKCB-205ENST00000472066 FBRSQ9HAH7 460 aa12.55□□□□□ -0.4
PRKCB-205ENST00000472066 SP110Q9HB58 689 aa12.55□□□□□ -0.4
PRKCB-205ENST00000472066 KCND1Q9NSA2 647 aa12.55□□□□□ -0.4
PRKCB-205ENST00000472066 BCCIPQ9P287 314 aaKnown RBP eCLIP12.55□□□□□ -0.4
PRKCB-205ENST00000472066 SAE1Q9UBE0 346 aaPredicted RBP12.55□□□□□ -0.4
PRKCB-205ENST00000472066 CCDC163A0A0D9SF12 145 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 H0Y858 1186 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 MCF2LO15068 1137 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 AXIN1O15169 862 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 BNIP3LO60238 219 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 KIF5CO60282 957 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 PEX11BO96011 259 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 C7P10643 843 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 TGM2P21980 687 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 CCNCP24863 283 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 NR2C2P49116 596 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 FNTBP49356 437 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 RPS14P62263 151 aaKnown RBP12.54□□□□□ -0.4
PRKCB-205ENST00000472066 TCF15Q12870 199 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 RFTN1Q14699 578 aaPredicted RBP12.54□□□□□ -0.4
PRKCB-205ENST00000472066 LBRQ14739 615 aaKnown RBP12.54□□□□□ -0.4
PRKCB-205ENST00000472066 CARD16Q5EG05 197 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 BZW1Q7L1Q6 419 aaKnown RBP12.54□□□□□ -0.4
PRKCB-205ENST00000472066 WDR5BQ86VZ2 330 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 LONP2Q86WA8 852 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 PGBD3Q8N328 593 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 SLC35F6Q8N357 371 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 CCNYQ8ND76 341 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 P3H4Q92791 437 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 CCDC114Q96M63 670 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 KCNH6Q9H252 994 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 JRKLQ9Y4A0 524 aa12.54□□□□□ -0.4
PRKCB-205ENST00000472066 CUL9Q8IWT3 2517 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 KCNK3O14649 394 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 ENC1O14682 589 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 MATN3O15232 486 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 ALOX15BO15296 676 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 RNASEH1O60930 286 aaKnown RBP12.53□□□□□ -0.4
PRKCB-205ENST00000472066 TJP3O95049 919 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 GSRP00390 522 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 PECAM1P16284 738 aaPredicted RBP12.53□□□□□ -0.4
PRKCB-205ENST00000472066 RECQLP46063 649 aaPredicted RBP12.53□□□□□ -0.4
PRKCB-205ENST00000472066 RHOAP61586 193 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 SNRPD1P62314 119 aaKnown RBP12.53□□□□□ -0.4
PRKCB-205ENST00000472066 SLC10A7Q0GE19 358 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 ELAVL3Q14576 367 aaKnown RBP12.53□□□□□ -0.4
PRKCB-205ENST00000472066 PDK1Q15118 436 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 TMCO4Q5TGY1 634 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 TIGD7Q6NT04 549 aaPredicted RBP12.53□□□□□ -0.4
PRKCB-205ENST00000472066 KIAA1324Q6UXG2 1013 aaKnown RBP12.53□□□□□ -0.4
PRKCB-205ENST00000472066 DPY19L3Q6ZPD9 716 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 OR2AP1Q8NGE2 309 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 LRRN4Q8WUT4 740 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 NSMCE1Q8WV22 266 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 OR8D1Q8WZ84 308 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 PRCCQ92733 491 aaPredicted RBP12.53□□□□□ -0.4
PRKCB-205ENST00000472066 FATE1Q969F0 183 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 HDAC11Q96DB2 347 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 SIPA1Q96FS4 1042 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 OLFM3Q96PB7 478 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 LGMNQ99538 433 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 TPSD1Q9BZJ3 242 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 TM6SF2Q9BZW4 377 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 CARD9Q9H257 536 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 ZSCAN32Q9NX65 697 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 HECAQ9UBI9 543 aaPredicted RBP12.53□□□□□ -0.4
PRKCB-205ENST00000472066 LHX3Q9UBR4 397 aa12.53□□□□□ -0.4
PRKCB-205ENST00000472066 FARP1Q9Y4F1 1045 aaPredicted RBP12.53□□□□□ -0.4
PRKCB-205ENST00000472066 MUC22E2RYF6 1773 aaPredicted RBP12.53□□□□□ -0.4
PRKCB-205ENST00000472066 DOCK4Q8N1I0 1966 aa12.52□□□□□ -0.4
PRKCB-205ENST00000472066 APOC4-APOC2K7ER74 178 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 PPP1R12AO14974 1030 aaPredicted RBP12.52□□□□□ -0.41
PRKCB-205ENST00000472066 POP4O95707 220 aaKnown RBP12.52□□□□□ -0.41
PRKCB-205ENST00000472066 APOC2P02655 101 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 ACADMP11310 421 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 MSNP26038 577 aaKnown RBP12.52□□□□□ -0.41
PRKCB-205ENST00000472066 CHRNA3P32297 505 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 RENBPP51606 427 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 CCNHP51946 323 aaPredicted RBP12.52□□□□□ -0.41
PRKCB-205ENST00000472066 ZBTB16Q05516 673 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 ZNF33AQ06730 810 aa12.52□□□□□ -0.41
PRKCB-205ENST00000472066 PPIDQ08752 370 aaKnown RBP12.52□□□□□ -0.41
PRKCB-205ENST00000472066 NSUN2Q08J23 767 aaKnown RBP eCLIP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms