RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 RFTN1Q14699 578 aaPredicted RBP15.4■□□□□ 0.06
SNX13-205ENST00000471744 TMCO4Q5TGY1 634 aa15.4■□□□□ 0.06
SNX13-205ENST00000471744 FAM46CQ5VWP2 391 aa15.4■□□□□ 0.06
SNX13-205ENST00000471744 Q6ZVU0 165 aa15.4■□□□□ 0.06
SNX13-205ENST00000471744 RCOR2Q8IZ40 523 aa15.4■□□□□ 0.06
SNX13-205ENST00000471744 STK40Q8N2I9 435 aa15.4■□□□□ 0.06
SNX13-205ENST00000471744 EXD1Q8NHP7 514 aa15.4■□□□□ 0.06
SNX13-205ENST00000471744 GOLPH3Q9H4A6 298 aa15.4■□□□□ 0.06
SNX13-205ENST00000471744 MTG2Q9H4K7 406 aa15.4■□□□□ 0.06
SNX13-205ENST00000471744 ITM2CQ9NQX7 267 aa15.4■□□□□ 0.06
SNX13-205ENST00000471744 ETNK2Q9NVF9 386 aa15.4■□□□□ 0.06
SNX13-205ENST00000471744 FAM86C1Q9NVL1 165 aa15.4■□□□□ 0.06
SNX13-205ENST00000471744 USP36Q9P275 1121 aaKnown RBP15.4■□□□□ 0.06
SNX13-205ENST00000471744 RAPGEFL1Q9UHV5 662 aa15.4■□□□□ 0.06
SNX13-205ENST00000471744 IPO11Q9UI26 975 aaKnown RBP15.4■□□□□ 0.06
SNX13-205ENST00000471744 AMFRQ9UKV5 643 aa15.4■□□□□ 0.06
SNX13-205ENST00000471744 NUMA1Q14980 2115 aa15.4■□□□□ 0.06
SNX13-205ENST00000471744 RALGAPA1Q6GYQ0 2036 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 RIF1Q5UIP0 2472 aaKnown RBP15.39■□□□□ 0.05
SNX13-205ENST00000471744 C3orf70A6NLC5 250 aaPredicted RBP15.39■□□□□ 0.05
SNX13-205ENST00000471744 K7ERQ8 282 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 SMAD6O43541 496 aaKnown RBP15.39■□□□□ 0.05
SNX13-205ENST00000471744 CD160O95971 181 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 GSRP00390 522 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 IGLV3-19P01714 112 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 PRNPP04156 253 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 MX2P20592 715 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 C5AR1P21730 350 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 CTNNA2P26232 953 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 CETN2P41208 172 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 COPS2P61201 443 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 TFDP2Q14188 446 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 ELF2Q15723 593 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 CST6Q15828 149 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 MAP7D1Q3KQU3 841 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 CARD16Q5EG05 197 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 NCBP2-AS2Q69YL0 99 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 USP30Q70CQ3 517 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 PEX26Q7Z412 305 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 KBTBD6Q86V97 674 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 ATPAF2Q8N5M1 289 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 UBL4BQ8N7F7 174 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 NSMCE1Q8WV22 266 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 NKD2Q969F2 451 aaPredicted RBP15.39■□□□□ 0.05
SNX13-205ENST00000471744 ERLEC1Q96DZ1 483 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 ZNF830Q96NB3 372 aaPredicted RBP15.39■□□□□ 0.05
SNX13-205ENST00000471744 ZNF599Q96NL3 588 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 FAM129BQ96TA1 746 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 PABPC3Q9H361 631 aaKnown RBP15.39■□□□□ 0.05
SNX13-205ENST00000471744 PDFQ9HBH1 243 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 TRIM10Q9UDY6 481 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 GUCA1BQ9UMX6 200 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 NCKAP1Q9Y2A7 1128 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 FCF1Q9Y324 198 aaKnown RBP15.39■□□□□ 0.05
SNX13-205ENST00000471744 PCDHA3Q9Y5H8 950 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 FAM186AA6NE01 2351 aa15.39■□□□□ 0.05
SNX13-205ENST00000471744 APOL1O14791 398 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 MAP3K13O43283 966 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 BNIP3LO60238 219 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 PALMO75781 387 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 RHOBTB1O94844 696 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 TMCC1O94876 653 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 IGSF6O95976 241 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 LMNAP02545 664 aaKnown RBP15.38■□□□□ 0.05
SNX13-205ENST00000471744 VAV1P15498 845 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 DNA2P51530 1060 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 TPMTP51580 245 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 RHOAP61586 193 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 RAD51Q06609 339 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 CCDC15Q0P6D6 951 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 PPP2R5EQ16537 467 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 TAZQ16635 292 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 TFDP3Q5H9I0 405 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 SPDYCQ5MJ68 293 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 SLC9A4Q6AI14 798 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 TIGD7Q6NT04 549 aaPredicted RBP15.38■□□□□ 0.05
SNX13-205ENST00000471744 BZW1Q7L1Q6 419 aaKnown RBP15.38■□□□□ 0.05
SNX13-205ENST00000471744 NT5DC3Q86UY8 548 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 RFX6Q8HWS3 928 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 MMAAQ8IVH4 418 aaKnown RBP15.38■□□□□ 0.05
SNX13-205ENST00000471744 BBS5Q8N3I7 341 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 PQLC3Q8N755 202 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 TMIEQ8NEW7 156 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 OR2AP1Q8NGE2 309 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 OR2A12Q8NGT7 310 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 RNF25Q96BH1 459 aaPredicted RBP15.38■□□□□ 0.05
SNX13-205ENST00000471744 LRIG1Q96JA1 1093 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 ZC3H10Q96K80 434 aaKnown RBP15.38■□□□□ 0.05
SNX13-205ENST00000471744 GDAP1L1Q96MZ0 367 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 ALS2CR12Q96Q35 445 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 SLC6A17Q9H1V8 727 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 PPP2R2CQ9Y2T4 447 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 MFHAS1Q9Y4C4 1052 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 OTOGLQ3ZCN5 2332 aa15.38■□□□□ 0.05
SNX13-205ENST00000471744 IGHV1OR15-9A0A0B4J2B8 117 aa15.37■□□□□ 0.05
SNX13-205ENST00000471744 J3KR12 359 aa15.37■□□□□ 0.05
SNX13-205ENST00000471744 MFSD11O43934 449 aa15.37■□□□□ 0.05
SNX13-205ENST00000471744 ZNF821O75541 412 aaPredicted RBP15.37■□□□□ 0.05
SNX13-205ENST00000471744 IL1BP01584 269 aa15.37■□□□□ 0.05
SNX13-205ENST00000471744 CD6P30203 668 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms