RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 CD93Q9NPY3 652 aa15.58■□□□□ 0.08
SDC3-203ENST00000471567 DDX56Q9NY93 547 aaKnown RBP15.58■□□□□ 0.08
SDC3-203ENST00000471567 PPM1HQ9ULR3 514 aa15.58■□□□□ 0.08
SDC3-203ENST00000471567 FCF1Q9Y324 198 aaKnown RBP15.58■□□□□ 0.08
SDC3-203ENST00000471567 ABCA7Q8IZY2 2146 aa15.58■□□□□ 0.08
SDC3-203ENST00000471567 NUP205Q92621 2012 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 C1QTNF3-AMACRE9PGA6 284 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 MID1O15344 667 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 PRAMEF11O60813 436 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 LRP3O75074 770 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 GSRP00390 522 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 IL1BP01584 269 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 CD48P09326 243 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 CHRNA3P32297 505 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 RPL6Q02878 288 aaKnown RBP15.57■□□□□ 0.08
SDC3-203ENST00000471567 MMRN1Q13201 1228 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 ANKRD20A8PQ5CZ79 823 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 CACUL1Q86Y37 369 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 LRRC49Q8IUZ0 686 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 CADM4Q8NFZ8 388 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 TPCN2Q8NHX9 752 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 LACRTQ9GZZ8 138 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 TNKS2Q9H2K2 1166 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 PDFQ9HBH1 243 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 SGK2Q9HBY8 427 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 ETNK2Q9NVF9 386 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 FBXL12Q9NXK8 326 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 UBA2Q9UBT2 640 aaPredicted RBP15.57■□□□□ 0.08
SDC3-203ENST00000471567 SALL4Q9UJQ4 1053 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 FZD4Q9ULV1 537 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 ACTL7AQ9Y615 435 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 OTOGLQ3ZCN5 2332 aa15.57■□□□□ 0.08
SDC3-203ENST00000471567 RIF1Q5UIP0 2472 aaKnown RBP15.56■□□□□ 0.08
SDC3-203ENST00000471567 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 LRRD1A4D1F6 860 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 DFFAO00273 331 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 ARHGAP6O43182 974 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 PSTPIP1O43586 416 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 BNIP3LO60238 219 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 TMCC1O94876 653 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 PRNPP04156 253 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 DPP6P42658 865 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 PSMD8P48556 350 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 DHPSP49366 369 aaPredicted RBP15.56■□□□□ 0.08
SDC3-203ENST00000471567 DNA2P51530 1060 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 SNRPD1P62314 119 aaKnown RBP15.56■□□□□ 0.08
SDC3-203ENST00000471567 IL10RBQ08334 325 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 KIF5AQ12840 1032 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 PAFAH1B3Q15102 231 aaKnown RBP15.56■□□□□ 0.08
SDC3-203ENST00000471567 IFI16Q16666 785 aaKnown RBP15.56■□□□□ 0.08
SDC3-203ENST00000471567 DPY19L3Q6ZPD9 716 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 LRRC8AQ8IWT6 810 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 TMEFF1Q8IYR6 380 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 GPR161Q8N6U8 529 aaKnown RBP15.56■□□□□ 0.08
SDC3-203ENST00000471567 OR2AP1Q8NGE2 309 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 PCDH19Q8TAB3 1148 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 PIP4K2CQ8TBX8 421 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 GANCQ8TET4 914 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 RAPGEF5Q92565 580 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 FOXJ1Q92949 421 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 ZNF419Q96HQ0 510 aaPredicted RBP15.56■□□□□ 0.08
SDC3-203ENST00000471567 LRIG1Q96JA1 1093 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 OMDQ99983 421 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 HEPHQ9BQS7 1158 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 BTBD1Q9H0C5 482 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 KLHL11Q9NVR0 708 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 IL36AQ9UHA7 158 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 IPO11Q9UI26 975 aaKnown RBP15.56■□□□□ 0.08
SDC3-203ENST00000471567 MFHAS1Q9Y4C4 1052 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 HYOU1Q9Y4L1 999 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 DUSP10Q9Y6W6 482 aa15.56■□□□□ 0.08
SDC3-203ENST00000471567 THADAQ6YHU6 1953 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 A0A1W2PP55 124 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 BCLAF3A2AJT9 711 aaKnown RBP15.55■□□□□ 0.08
SDC3-203ENST00000471567 J3KR12 359 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 HOXD11P31277 338 aaPredicted RBP15.55■□□□□ 0.08
SDC3-203ENST00000471567 NAP1L1P55209 391 aaKnown RBP15.55■□□□□ 0.08
SDC3-203ENST00000471567 ZNF33AQ06730 810 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 CCDC15Q0P6D6 951 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 RFTN1Q14699 578 aaPredicted RBP15.55■□□□□ 0.08
SDC3-203ENST00000471567 ODF2Q5BJF6 829 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 LYSMD4Q5XG99 296 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 LEKR1Q6ZMV7 388 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 DAAM2Q86T65 1068 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 FAM124AQ86V42 546 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 AADATQ8N5Z0 425 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 CHST14Q8NCH0 376 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 FAM131CQ96AQ9 280 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 ZNF599Q96NL3 588 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 RNF157Q96PX1 679 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 HINFPQ9BQA5 517 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 DESI2Q9BSY9 194 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 GPR174Q9BXC1 333 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 NEUROG2Q9H2A3 272 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 SP110Q9HB58 689 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 HECAQ9UBI9 543 aaPredicted RBP15.55■□□□□ 0.08
SDC3-203ENST00000471567 SARDHQ9UL12 918 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 ADGRG1Q9Y653 693 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 WASF2Q9Y6W5 498 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 FAM186AA6NE01 2351 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms