RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 TBC1D3EA0A087X179 549 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 TBC1D3KA0A087X1G2 549 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 EME2A4GXA9 379 aaPredicted RBP6.04□□□□□ -1.44
VARS-222ENST00000470953 TBC1D3FA6NER0 549 aaPredicted RBP6.04□□□□□ -1.44
VARS-222ENST00000470953 TBC1D3LB9A6J9 549 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 NTN3O00634 580 aaPredicted RBP6.04□□□□□ -1.44
VARS-222ENST00000470953 SCAMP1O15126 338 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 MUSKO15146 869 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 NVLO15381 856 aaKnown RBP6.04□□□□□ -1.44
VARS-222ENST00000470953 TIMM44O43615 452 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 TCEA3O75764 348 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 BEST1O76090 585 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 SORBS2O94875 1100 aaKnown RBP6.04□□□□□ -1.44
VARS-222ENST00000470953 RTN3O95197 1032 aaPredicted RBP6.04□□□□□ -1.44
VARS-222ENST00000470953 ASS1P00966 412 aaKnown RBP6.04□□□□□ -1.44
VARS-222ENST00000470953 CST3P01034 146 aaPredicted RBP6.04□□□□□ -1.44
VARS-222ENST00000470953 HMBSP08397 361 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 FAM163BP0C2L3 166 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 TBC1D3HP0C7X1 549 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 CCDC130P13994 396 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 CAPN3P20807 821 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 ATP5C1P36542 298 aaKnown RBP6.04□□□□□ -1.44
VARS-222ENST00000470953 ASPAP45381 313 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 NDST1P52848 882 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 ENPEPQ07075 957 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 GOLGA8FQ08AF8 430 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 GOLGA8DPQ0D2H9 430 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 CST6Q15828 149 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 CAMK4Q16566 473 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 DEFB109BQ30KR1 87 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 NADK2Q4G0N4 442 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 ZCWPW2Q504Y3 356 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 ZRANB3Q5FWF4 1079 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 NUGGCQ68CJ6 796 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 TBC1D3GQ6DHY5 549 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 TBC1D3CQ6IPX1 549 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 TCTN3Q6NUS6 607 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 PAQR9Q6ZVX9 377 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 CHST9Q7L1S5 443 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 RAB11FIP2Q7L804 512 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 IQCHQ86VS3 1027 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 TBC1D3Q8IZP1 549 aaPredicted RBP6.04□□□□□ -1.44
VARS-222ENST00000470953 SLC22A18ASQ8N1D0 253 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 TTC39CQ8N584 583 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 ZMIZ2Q8NF64 920 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 WFDC5Q8TCV5 224 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 SLC2A14Q8TDB8 520 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 TAS1R2Q8TE23 839 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 NUDT8Q8WV74 236 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 APOBEC4Q8WW27 367 aaKnown RBP6.04□□□□□ -1.44
VARS-222ENST00000470953 ELMO3Q96BJ8 720 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 ARSGQ96EG1 525 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 MYO19Q96H55 970 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 DHTKD1Q96HY7 919 aaPredicted RBP6.04□□□□□ -1.44
VARS-222ENST00000470953 PPP1R13BQ96KQ4 1090 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 CEP63Q96MT8 703 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 NOX5Q96PH1 765 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 MYOCQ99972 504 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 OMDQ99983 421 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 NT5C1AQ9BXI3 368 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 SLC29A3Q9BZD2 475 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 XYLT2Q9H1B5 865 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 SYNDIG1Q9H7V2 258 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 VRTNQ9H8Y1 702 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 CYP3A43Q9HB55 503 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 METTL14Q9HCE5 456 aaKnown RBP6.04□□□□□ -1.44
VARS-222ENST00000470953 ABCB8Q9NUT2 735 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 KLHL11Q9NVR0 708 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 MAP10Q9P2G4 905 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 HMGXB4Q9UGU5 601 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 RABGEF1Q9UJ41 708 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 LSM7Q9UK45 103 aaKnown RBP6.04□□□□□ -1.44
VARS-222ENST00000470953 AGO1Q9UL18 857 aaKnown RBP6.04□□□□□ -1.44
VARS-222ENST00000470953 PLA2G4CQ9UP65 541 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 KMT2CQ8NEZ4 4911 aaKnown RBP6.04□□□□□ -1.44
VARS-222ENST00000470953 RNF212BA8MTL3 300 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 C9orf172C9J069 976 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 PES1O00541 588 aaKnown RBP6.03□□□□□ -1.44
VARS-222ENST00000470953 RRP9O43818 475 aaKnown RBP6.03□□□□□ -1.44
VARS-222ENST00000470953 ZG16O60844 167 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 GADD45BO75293 160 aaPredicted RBP6.03□□□□□ -1.44
VARS-222ENST00000470953 VNN1O95497 513 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 CBX6O95503 412 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 GNA14O95837 355 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 ALPPL2P10696 532 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 COX6B1P14854 86 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 CD19P15391 556 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 TBXAS1P24557 533 aaPredicted RBP6.03□□□□□ -1.44
VARS-222ENST00000470953 HOXD9P28356 352 aaPredicted RBP6.03□□□□□ -1.44
VARS-222ENST00000470953 OAS2P29728 719 aaKnown RBP6.03□□□□□ -1.44
VARS-222ENST00000470953 SLC8A1P32418 973 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 DRD3P35462 400 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 HARS2P49590 506 aaKnown RBP6.03□□□□□ -1.44
VARS-222ENST00000470953 ARSDP51689 593 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 STX17P56962 302 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 MAP3K7CLP57077 242 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 PPP2R2AP63151 447 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 CLDN10P78369 228 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 PPP3CAQ08209 521 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 SFSWAPQ12872 951 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms