RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 PRNPP04156 253 aa16.02■□□□□ 0.16
HDAC6-218ENST00000470942 IGHV4-34P06331 123 aa16.02■□□□□ 0.16
HDAC6-218ENST00000470942 CTSLP07711 333 aa16.02■□□□□ 0.16
HDAC6-218ENST00000470942 NOVA1P51513 510 aaKnown RBP16.02■□□□□ 0.16
HDAC6-218ENST00000470942 AFF3P51826 1226 aaKnown RBP16.02■□□□□ 0.16
HDAC6-218ENST00000470942 ADPRHP54922 357 aa16.02■□□□□ 0.16
HDAC6-218ENST00000470942 TPI1P60174 286 aa16.02■□□□□ 0.16
HDAC6-218ENST00000470942 ZNF252P-AS1Q0IIN9 211 aa16.02■□□□□ 0.16
HDAC6-218ENST00000470942 TEAD4Q15561 434 aa16.02■□□□□ 0.16
HDAC6-218ENST00000470942 ERMARDQ5T6L9 678 aa16.02■□□□□ 0.16
HDAC6-218ENST00000470942 LEKR1Q6ZMV7 388 aa16.02■□□□□ 0.16
HDAC6-218ENST00000470942 FNIP1Q8TF40 1166 aa16.02■□□□□ 0.16
HDAC6-218ENST00000470942 CEP44Q9C0F1 390 aa16.02■□□□□ 0.16
HDAC6-218ENST00000470942 DHX35Q9H5Z1 703 aaKnown RBP16.02■□□□□ 0.16
HDAC6-218ENST00000470942 TM9SF3Q9HD45 589 aa16.02■□□□□ 0.16
HDAC6-218ENST00000470942 DYRK4Q9NR20 520 aa16.02■□□□□ 0.16
HDAC6-218ENST00000470942 IL36AQ9UHA7 158 aa16.02■□□□□ 0.16
HDAC6-218ENST00000470942 DOCK9Q9BZ29 2069 aa16.01■□□□□ 0.15
HDAC6-218ENST00000470942 TP53BP1Q12888 1972 aaPredicted RBP16.01■□□□□ 0.15
HDAC6-218ENST00000470942 A0A087X0T9 212 aa16.01■□□□□ 0.15
HDAC6-218ENST00000470942 DAPK3O43293 454 aa16.01■□□□□ 0.15
HDAC6-218ENST00000470942 FAM228BP0C875 321 aa16.01■□□□□ 0.15
HDAC6-218ENST00000470942 MIPP30301 263 aa16.01■□□□□ 0.15
HDAC6-218ENST00000470942 GEMIN4P57678 1058 aaKnown RBP16.01■□□□□ 0.15
HDAC6-218ENST00000470942 CARD16Q5EG05 197 aa16.01■□□□□ 0.15
HDAC6-218ENST00000470942 ARSIQ5FYB1 569 aa16.01■□□□□ 0.15
HDAC6-218ENST00000470942 CCDC122Q5T0U0 273 aa16.01■□□□□ 0.15
HDAC6-218ENST00000470942 SPECC1LQ69YQ0 1117 aa16.01■□□□□ 0.15
HDAC6-218ENST00000470942 PSAPL1Q6NUJ1 521 aa16.01■□□□□ 0.15
HDAC6-218ENST00000470942 DPY19L3Q6ZPD9 716 aa16.01■□□□□ 0.15
HDAC6-218ENST00000470942 ADAT2Q7Z6V5 191 aaKnown RBP16.01■□□□□ 0.15
HDAC6-218ENST00000470942 RYBPQ8N488 228 aaPredicted RBP16.01■□□□□ 0.15
HDAC6-218ENST00000470942 ARFGAP1Q8N6T3 406 aa16.01■□□□□ 0.15
HDAC6-218ENST00000470942 PCDH20Q8N6Y1 951 aaKnown RBP16.01■□□□□ 0.15
HDAC6-218ENST00000470942 TMIEQ8NEW7 156 aa16.01■□□□□ 0.15
HDAC6-218ENST00000470942 GRIN3AQ8TCU5 1115 aa16.01■□□□□ 0.15
HDAC6-218ENST00000470942 OSGEPQ9NPF4 335 aa16.01■□□□□ 0.15
HDAC6-218ENST00000470942 TMEM131Q92545 1883 aa16.01■□□□□ 0.15
HDAC6-218ENST00000470942 NCOR2Q9Y618 2525 aa16.01■□□□□ 0.15
HDAC6-218ENST00000470942 KNL1Q8NG31 2342 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 A0A1W2PPC4 97 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 RASA4BC9J798 803 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 EEF2KO00418 725 aaKnown RBP16■□□□□ 0.15
HDAC6-218ENST00000470942 FGF10O15520 208 aaPredicted RBP16■□□□□ 0.15
HDAC6-218ENST00000470942 SLC7A4O43246 635 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 RASA4O43374 803 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 PLRG1O43660 514 aaKnown RBP16■□□□□ 0.15
HDAC6-218ENST00000470942 BUB1O43683 1085 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 KDELR3O43731 214 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 ZNF821O75541 412 aaPredicted RBP16■□□□□ 0.15
HDAC6-218ENST00000470942 CD160O95971 181 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 TPM1P09493 284 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 HTR7P34969 479 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 EIF4A3P38919 411 aaKnown RBP16■□□□□ 0.15
HDAC6-218ENST00000470942 CCR5P51681 352 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 YBEYP58557 167 aaPredicted RBP16■□□□□ 0.15
HDAC6-218ENST00000470942 CCDC15Q0P6D6 951 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 SEMA3BQ13214 749 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 TRIM14Q14142 442 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 CA9Q16790 459 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 ALKBH5Q6P6C2 394 aaKnown RBP16■□□□□ 0.15
HDAC6-218ENST00000470942 IL27RAQ6UWB1 636 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 DEFB124Q8NES8 71 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 ARRDC3Q96B67 414 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 PEBP4Q96S96 227 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 KCTD15Q96SI1 283 aaPredicted RBP16■□□□□ 0.15
HDAC6-218ENST00000470942 NCAPGQ9BPX3 1015 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 HEPHQ9BQS7 1158 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 SNRNP25Q9BV90 132 aaKnown RBP16■□□□□ 0.15
HDAC6-218ENST00000470942 TM6SF2Q9BZW4 377 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 THAP2Q9H0W7 228 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 KDM4CQ9H3R0 1056 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 SLC32A1Q9H598 525 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 GAREM1Q9H706 876 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 EBF2Q9HAK2 575 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 DNAAF2Q9NVR5 837 aaKnown RBP16■□□□□ 0.15
HDAC6-218ENST00000470942 ARHGAP20Q9P2F6 1191 aa16■□□□□ 0.15
HDAC6-218ENST00000470942 CXorf51AA0A1B0GTR3 108 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 ZSCAN5CA6NGD5 496 aaPredicted RBP15.99■□□□□ 0.15
HDAC6-218ENST00000470942 WASH4PA8MWX3 477 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 EIF3CLB5ME19 914 aaKnown RBP15.99■□□□□ 0.15
HDAC6-218ENST00000470942 GIPC1O14908 333 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 LRCH4O75427 683 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 LEFTY1O75610 366 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 CER1O95813 267 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 ADRB1P08588 477 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 CSRP1P21291 193 aaKnown RBP15.99■□□□□ 0.15
HDAC6-218ENST00000470942 MAT2AP31153 395 aaKnown RBP15.99■□□□□ 0.15
HDAC6-218ENST00000470942 GRIA4P48058 902 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 CCNHP51946 323 aaPredicted RBP15.99■□□□□ 0.15
HDAC6-218ENST00000470942 PPP2CBP62714 309 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 RACK1P63244 317 aaKnown RBP15.99■□□□□ 0.15
HDAC6-218ENST00000470942 PPP2CAP67775 309 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 BNC1Q01954 994 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 TSR1Q2NL82 804 aaKnown RBP15.99■□□□□ 0.15
HDAC6-218ENST00000470942 HLA-BQ31612 363 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 PPP6R3Q5H9R7 873 aaPredicted RBP15.99■□□□□ 0.15
HDAC6-218ENST00000470942 N4BP2L1Q5TBK1 243 aaPredicted RBP15.99■□□□□ 0.15
HDAC6-218ENST00000470942 AGBL4Q5VU57 503 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 LAYNQ6UX15 382 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms