RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 BRIX1Q8TDN6 353 aaKnown RBP6.69□□□□□ -1.34
PTCD3-208ENST00000469585 PPM1EQ8WY54 764 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 POMGNT1Q8WZA1 660 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 MRGPRX1Q96LB2 322 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 TSPAN18Q96SJ8 248 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 CDX2Q99626 313 aaPredicted RBP6.69□□□□□ -1.34
PTCD3-208ENST00000469585 MMTAG2Q9BU76 263 aaKnown RBP6.69□□□□□ -1.34
PTCD3-208ENST00000469585 MSTO1Q9BUK6 570 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 C1QTNF3Q9BXJ4 246 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 DNAI2Q9GZS0 605 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 RPF1Q9H9Y2 349 aaKnown RBP6.69□□□□□ -1.34
PTCD3-208ENST00000469585 MTMR10Q9NXD2 777 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 RCOR1Q9UKL0 485 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 SLC45A2Q9UMX9 530 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 PCDHA7Q9UN72 937 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 TNFSF13BQ9Y275 285 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 GDAQ9Y2T3 454 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 TESMINQ9Y4I5 508 aa6.69□□□□□ -1.34
PTCD3-208ENST00000469585 MKI67P46013 3256 aaKnown RBP6.68□□□□□ -1.34
PTCD3-208ENST00000469585 PVALEFA0A1B0GWK0 134 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 H3BNC9 293 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 MGEA5O60502 916 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 TADA2AO75478 443 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 URODP06132 367 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 APOBEC3AP31941 199 aaPredicted RBP6.68□□□□□ -1.34
PTCD3-208ENST00000469585 MLH1P40692 756 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 PPP1R2P41236 205 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 OR1G1P47890 313 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 FAM189BP81408 668 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 SEMA5AQ13591 1074 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 SMC1AQ14683 1233 aaKnown RBP6.68□□□□□ -1.34
PTCD3-208ENST00000469585 GPNMBQ14956 572 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 CDSNQ15517 529 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 LONRF3Q496Y0 759 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 MAP9Q49MG5 647 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 AGAP9Q5VTM2 703 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 ARMCX5Q6P1M9 558 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 DARS2Q6PI48 645 aaKnown RBP6.68□□□□□ -1.34
PTCD3-208ENST00000469585 Q7L0L9 218 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 TMCO2Q7Z6W1 182 aaPredicted RBP6.68□□□□□ -1.34
PTCD3-208ENST00000469585 SFR1Q86XK3 245 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 PDSS2Q86YH6 399 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 CD302Q8IX05 232 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 COLGALT1Q8NBJ5 622 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 CACTINQ8WUQ7 758 aaKnown RBP6.68□□□□□ -1.34
PTCD3-208ENST00000469585 MRPL38Q96DV4 380 aaKnown RBP6.68□□□□□ -1.34
PTCD3-208ENST00000469585 UROC1Q96N76 676 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 CDCA3Q99618 268 aaPredicted RBP6.68□□□□□ -1.34
PTCD3-208ENST00000469585 TMEM175Q9BSA9 504 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 NTPCRQ9BSD7 190 aaKnown RBP6.68□□□□□ -1.34
PTCD3-208ENST00000469585 KIFC3Q9BVG8 833 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 FZD8Q9H461 694 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 BRD9Q9H8M2 597 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 KIAA1586Q9HCI6 787 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 SARS2Q9NP81 518 aaKnown RBP6.68□□□□□ -1.34
PTCD3-208ENST00000469585 OLFML3Q9NRN5 406 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 RLIMQ9NVW2 624 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 CGNQ9P2M7 1197 aaKnown RBP6.68□□□□□ -1.34
PTCD3-208ENST00000469585 TBX20Q9UMR3 447 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 LZTS1Q9Y250 596 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 DNAH12Q6ZR08 3092 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 UBE4BO95155 1302 aa6.68□□□□□ -1.34
PTCD3-208ENST00000469585 A0A1B0GVL5 298 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 ARL5CA6NH57 179 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 C5orf67F2Z3F1 127 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 MUSKO15146 869 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 EIF3DO15371 548 aaKnown RBP eCLIP6.67□□□□□ -1.34
PTCD3-208ENST00000469585 PHGDHO43175 533 aaKnown RBP6.67□□□□□ -1.34
PTCD3-208ENST00000469585 FRS3O43559 492 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 FGF18O76093 207 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 AGFG2O95081 481 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 CSPG5O95196 566 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 IL18RAPO95256 599 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 CLTAP09496 248 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 PFKFB1P16118 471 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 ATF7P17544 494 aaPredicted RBP6.67□□□□□ -1.34
PTCD3-208ENST00000469585 HDCP19113 662 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 GCSHP23434 173 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 PAX3P23760 479 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 ZNF131P52739 623 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 OSTNP61366 133 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 SNRPFP62306 86 aaKnown RBP6.67□□□□□ -1.34
PTCD3-208ENST00000469585 PKP1Q13835 747 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 KHDC1LQ5JSQ8 128 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 UNC13DQ70J99 1090 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 TMPRSS6Q8IU80 811 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 TMEM161BQ8NDZ6 487 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 BEST2Q8NFU1 509 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 PJA1Q8NG27 643 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 TBC1D15Q8TC07 691 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 GDPD5Q8WTR4 605 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 DVL3Q92997 716 aaPredicted RBP6.67□□□□□ -1.34
PTCD3-208ENST00000469585 ZNF689Q96CS4 500 aaPredicted RBP6.67□□□□□ -1.34
PTCD3-208ENST00000469585 CASD1Q96PB1 797 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 FNBP1Q96RU3 617 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 GAD1Q99259 594 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 TSG101Q99816 390 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 C17orf80Q9BSJ5 609 aa6.67□□□□□ -1.34
PTCD3-208ENST00000469585 NXF3Q9H4D5 531 aaKnown RBP6.67□□□□□ -1.34
PTCD3-208ENST00000469585 PDZD7Q9H5P4 517 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms