RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 SYNCQ9H7C4 482 aa12.55□□□□□ -0.4
HDAC3-204ENST00000469207 KLHL11Q9NVR0 708 aa12.55□□□□□ -0.4
HDAC3-204ENST00000469207 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.55□□□□□ -0.4
HDAC3-204ENST00000469207 RWDD2AQ9UIY3 292 aa12.55□□□□□ -0.4
HDAC3-204ENST00000469207 GCN1Q92616 2671 aaKnown RBP12.54□□□□□ -0.4
HDAC3-204ENST00000469207 LY6G6EA0A0G2JKS1 128 aa12.54□□□□□ -0.4
HDAC3-204ENST00000469207 POM121BA6NF01 834 aa12.54□□□□□ -0.4
HDAC3-204ENST00000469207 RRP8O43159 456 aaKnown RBP12.54□□□□□ -0.4
HDAC3-204ENST00000469207 PIAS2O75928 621 aa12.54□□□□□ -0.4
HDAC3-204ENST00000469207 FGFR1OPO95684 399 aaKnown RBP12.54□□□□□ -0.4
HDAC3-204ENST00000469207 MPOP05164 745 aa12.54□□□□□ -0.4
HDAC3-204ENST00000469207 KRT83P78385 493 aa12.54□□□□□ -0.4
HDAC3-204ENST00000469207 DEUP1Q05D60 604 aa12.54□□□□□ -0.4
HDAC3-204ENST00000469207 MAPK8IP2Q13387 824 aaPredicted RBP12.54□□□□□ -0.4
HDAC3-204ENST00000469207 ILKQ13418 452 aa12.54□□□□□ -0.4
HDAC3-204ENST00000469207 HSP90AA4PQ58FG1 418 aa12.54□□□□□ -0.4
HDAC3-204ENST00000469207 TPRG1LQ5T0D9 272 aa12.54□□□□□ -0.4
HDAC3-204ENST00000469207 TAF3Q5VWG9 929 aa12.54□□□□□ -0.4
HDAC3-204ENST00000469207 Q6ZSR6 202 aa12.54□□□□□ -0.4
HDAC3-204ENST00000469207 ERN2Q76MJ5 926 aaKnown RBP12.54□□□□□ -0.4
HDAC3-204ENST00000469207 ZNF397Q8NF99 534 aaPredicted RBP12.54□□□□□ -0.4
HDAC3-204ENST00000469207 OR4C6Q8NH72 309 aa12.54□□□□□ -0.4
HDAC3-204ENST00000469207 APOLD1Q96LR9 279 aa12.54□□□□□ -0.4
HDAC3-204ENST00000469207 UBL7Q96S82 380 aaPredicted RBP12.54□□□□□ -0.4
HDAC3-204ENST00000469207 KLF15Q9UIH9 416 aa12.54□□□□□ -0.4
HDAC3-204ENST00000469207 WASF2Q9Y6W5 498 aa12.54□□□□□ -0.4
HDAC3-204ENST00000469207 U3KQA8 63 aa12.54□□□□□ -0.4
HDAC3-204ENST00000469207 OPA1O60313 960 aa12.53□□□□□ -0.4
HDAC3-204ENST00000469207 CD160O95971 181 aa12.53□□□□□ -0.4
HDAC3-204ENST00000469207 HNRNPA2B1P22626 353 aaKnown RBP12.53□□□□□ -0.4
HDAC3-204ENST00000469207 OR1E1P30953 314 aa12.53□□□□□ -0.4
HDAC3-204ENST00000469207 NUDT1P36639 197 aa12.53□□□□□ -0.4
HDAC3-204ENST00000469207 FLT3P36888 993 aa12.53□□□□□ -0.4
HDAC3-204ENST00000469207 MTIF2P46199 727 aaKnown RBP12.53□□□□□ -0.4
HDAC3-204ENST00000469207 DNA2P51530 1060 aa12.53□□□□□ -0.4
HDAC3-204ENST00000469207 E2F1Q01094 437 aa12.53□□□□□ -0.4
HDAC3-204ENST00000469207 NEK5Q6P3R8 708 aa12.53□□□□□ -0.4
HDAC3-204ENST00000469207 C22orf39Q6P5X5 142 aa12.53□□□□□ -0.4
HDAC3-204ENST00000469207 PCSK4Q6UW60 755 aa12.53□□□□□ -0.4
HDAC3-204ENST00000469207 PHLDB2Q86SQ0 1253 aa12.53□□□□□ -0.4
HDAC3-204ENST00000469207 ERICH1Q86X53 443 aa12.53□□□□□ -0.4
HDAC3-204ENST00000469207 SPACA3Q8IXA5 215 aa12.53□□□□□ -0.4
HDAC3-204ENST00000469207 SNIP1Q8TAD8 396 aaKnown RBP12.53□□□□□ -0.4
HDAC3-204ENST00000469207 NT5C3BQ969T7 300 aa12.53□□□□□ -0.4
HDAC3-204ENST00000469207 C2orf49Q9BVC5 232 aaPredicted RBP12.53□□□□□ -0.4
HDAC3-204ENST00000469207 SLC17A9Q9BYT1 436 aa12.53□□□□□ -0.4
HDAC3-204ENST00000469207 NDFIP2Q9NV92 336 aa12.53□□□□□ -0.4
HDAC3-204ENST00000469207 DNAJC28Q9NX36 388 aa12.53□□□□□ -0.4
HDAC3-204ENST00000469207 KIAA1468Q9P260 1216 aa12.53□□□□□ -0.4
HDAC3-204ENST00000469207 ZNF212Q9UDV6 495 aa12.53□□□□□ -0.4
HDAC3-204ENST00000469207 IL36AQ9UHA7 158 aa12.53□□□□□ -0.4
HDAC3-204ENST00000469207 GGT7Q9UJ14 662 aa12.53□□□□□ -0.4
HDAC3-204ENST00000469207 FCF1Q9Y324 198 aaKnown RBP12.53□□□□□ -0.4
HDAC3-204ENST00000469207 FARP1Q9Y4F1 1045 aaPredicted RBP12.53□□□□□ -0.4
HDAC3-204ENST00000469207 GOLGA8SH3BPF8 625 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 K7ESM1 405 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 USP12O75317 370 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 ZMPSTE24O75844 475 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 PRNPP04156 253 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 CKMT1AP12532 417 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 AKT2P31751 481 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 CXADRP78310 365 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 ARF5P84085 180 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 TLE3Q04726 772 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 FZD2Q14332 565 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 DRAP1Q14919 205 aaPredicted RBP12.52□□□□□ -0.41
HDAC3-204ENST00000469207 TBC1D25Q3MII6 688 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 TMEM259Q4ZIN3 620 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 BRMS1LQ5PSV4 323 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 FAM102AQ5T9C2 384 aaPredicted RBP12.52□□□□□ -0.41
HDAC3-204ENST00000469207 CDCP2Q5VXM1 449 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 LRRC31Q6UY01 552 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 LEKR1Q6ZMV7 388 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 PTAR1Q7Z6K3 402 aaPredicted RBP12.52□□□□□ -0.41
HDAC3-204ENST00000469207 ABI3BPQ7Z7G0 1075 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 SETD3Q86TU7 594 aaPredicted RBP12.52□□□□□ -0.41
HDAC3-204ENST00000469207 FAM131BQ86XD5 332 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 XYLT1Q86Y38 959 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 FAM71AQ8IYT1 594 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 CACTIN-AS1Q8N1I8 211 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 NETO2Q8NC67 525 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 OR6K2Q8NGY2 324 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 C18orf8Q96DM3 657 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 FAM81BQ96LP2 452 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 C1orf74Q96LT6 269 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 CFAP57Q96MR6 1250 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 HDAC8Q9BY41 377 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 PDCL3Q9H2J4 239 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 DYRK4Q9NR20 520 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 FADS3Q9Y5Q0 445 aa12.52□□□□□ -0.41
HDAC3-204ENST00000469207 MGAQ8IWI9 3026 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 IGLV3-10A0A075B6K4 115 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 IGLON5A6NGN9 336 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 ATXN7O15265 892 aaPredicted RBP12.51□□□□□ -0.41
HDAC3-204ENST00000469207 SPINT1O43278 529 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 ADRB3P13945 408 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 CYP11B1P15538 503 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 ITIH2P19823 946 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 TGM2P21980 687 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 ACTN2P35609 894 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms