RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 AIF1P55008 147 aa19.49■□□□□ 0.71
COL7A1-207ENST00000467985 SETMARQ53H47 684 aaPredicted RBP19.49■□□□□ 0.71
COL7A1-207ENST00000467985 RAB6CQ53S08 254 aa19.49■□□□□ 0.71
COL7A1-207ENST00000467985 NAPEPLDQ6IQ20 393 aa19.49■□□□□ 0.71
COL7A1-207ENST00000467985 NEK5Q6P3R8 708 aa19.49■□□□□ 0.71
COL7A1-207ENST00000467985 LAYNQ6UX15 382 aa19.49■□□□□ 0.71
COL7A1-207ENST00000467985 SLFN11Q7Z7L1 901 aa19.49■□□□□ 0.71
COL7A1-207ENST00000467985 RHBDD1Q8TEB9 315 aa19.49■□□□□ 0.71
COL7A1-207ENST00000467985 PPP1R16AQ96I34 528 aa19.49■□□□□ 0.71
COL7A1-207ENST00000467985 RAB6CQ9H0N0 254 aa19.49■□□□□ 0.71
COL7A1-207ENST00000467985 MAGEH1Q9H213 219 aa19.49■□□□□ 0.71
COL7A1-207ENST00000467985 TMEM248Q9NWD8 314 aa19.49■□□□□ 0.71
COL7A1-207ENST00000467985 IL36AQ9UHA7 158 aa19.49■□□□□ 0.71
COL7A1-207ENST00000467985 HPCAL4Q9UM19 191 aa19.49■□□□□ 0.71
COL7A1-207ENST00000467985 FREM2Q5SZK8 3169 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 TCRBV5S1A1TA0A578 114 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 PLK4O00444 970 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 KPNA3O00505 521 aaPredicted RBP19.48■□□□□ 0.71
COL7A1-207ENST00000467985 YKT6O15498 198 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 HYAL3O43820 417 aaPredicted RBP19.48■□□□□ 0.71
COL7A1-207ENST00000467985 LRIG2O94898 1065 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 CTSLP07711 333 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 FTH1P19P0C7X4 201 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 TNFAIP3P21580 790 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 GRK6P43250 576 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 PPP2CBP62714 309 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 PPP2CAP67775 309 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 OVGP1Q12889 678 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 POM121L1PQ3SYA9 428 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 EFHC2Q5JST6 749 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 KCNT1Q5JUK3 1230 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 DCUN1D2Q6PH85 259 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 UNQ6494/PRO21346Q6UXR6 183 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 RAB44Q7Z6P3 723 aaPredicted RBP19.48■□□□□ 0.71
COL7A1-207ENST00000467985 IQCHQ86VS3 1027 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 NLRP14Q86W24 1093 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 MCOLN2Q8IZK6 566 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 CCDC185Q8N715 623 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 BAHD1Q8TBE0 780 aaPredicted RBP19.48■□□□□ 0.71
COL7A1-207ENST00000467985 BAP1Q92560 729 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 ISG20Q96AZ6 181 aaKnown RBP19.48■□□□□ 0.71
COL7A1-207ENST00000467985 MCEEQ96PE7 176 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 ELF4Q99607 663 aaPredicted RBP19.48■□□□□ 0.71
COL7A1-207ENST00000467985 CNPY3Q9BT09 278 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 HDAC8Q9BY41 377 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 GDF3Q9NR23 364 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 CHD6Q8TD26 2715 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 TMEM131Q92545 1883 aa19.48■□□□□ 0.71
COL7A1-207ENST00000467985 A0A1B0GTQ1 180 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 A0A1W2PR77 199 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 FAM221BA6H8Z2 402 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 FAM72CH0Y354 149 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 TLR4O00206 839 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 MAGEC1O60732 1142 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 RAMP2O60895 175 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 TOP3BO95985 862 aaKnown RBP19.47■□□□□ 0.71
COL7A1-207ENST00000467985 WNT1P04628 370 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 PROS1P07225 676 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 SPINK2P20155 84 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 L1CAMP32004 1257 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 ARF5P84085 180 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 PPP1R15BQ5SWA1 713 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 PIP5KL1Q5T9C9 394 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 FAM72AQ5TYM5 149 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 FAM72DQ6L9T8 149 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 DPY19L3Q6ZPD9 716 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 FAM72BQ86X60 149 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 PLPP6Q8IY26 295 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 MFSD2AQ8NA29 543 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 ADAMTS14Q8WXS8 1223 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 ARHGEF2Q92974 986 aaKnown RBP19.47■□□□□ 0.71
COL7A1-207ENST00000467985 TNKS2Q9H2K2 1166 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 TSPY26PQ9H489 355 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 ARHGAP20Q9P2F6 1191 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 DNAI1Q9UI46 699 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 MSRB2Q9Y3D2 182 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 DMXL2Q8TDJ6 3036 aa19.47■□□□□ 0.71
COL7A1-207ENST00000467985 A0A1B0GTH6 734 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 TMEM8BA6NDV4 472 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 LRRC53A6NM62 1247 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 PRAMEF26H0Y7S4 382 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 KCNK3O14649 394 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 CCP110O43303 1012 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 RNGTTO60942 597 aaKnown RBP19.46■□□□□ 0.71
COL7A1-207ENST00000467985 ARRB1P49407 418 aaPredicted RBP19.46■□□□□ 0.71
COL7A1-207ENST00000467985 DNA2P51530 1060 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 RPL7AP62424 266 aaKnown RBP19.46■□□□□ 0.71
COL7A1-207ENST00000467985 TPM4P67936 248 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 POLD3Q15054 466 aaPredicted RBP19.46■□□□□ 0.71
COL7A1-207ENST00000467985 ASIC2Q16515 512 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 CARD16Q5EG05 197 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 ARSIQ5FYB1 569 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 SCYL2Q6P3W7 929 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 ERN2Q76MJ5 926 aaKnown RBP19.46■□□□□ 0.71
COL7A1-207ENST00000467985 OXR1Q8N573 874 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 CHST14Q8NCH0 376 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 GRIN3AQ8TCU5 1115 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 EPAS1Q99814 870 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 HEPHQ9BQS7 1158 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 SYT11Q9BT88 431 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms