RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 RGL4Q8IZJ4 473 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 FIBINQ8TAL6 211 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 FAM71BQ8TC56 605 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.86■□□□□ 0.45
CPSF4-209ENST00000465132 WFIKKN2Q8TEU8 576 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 FOXJ1Q92949 421 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 RAB6CQ9H0N0 254 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 KIAA1522Q9P206 1035 aaPredicted RBP17.86■□□□□ 0.45
CPSF4-209ENST00000465132 THAP10Q9P2Z0 257 aaPredicted RBP17.86■□□□□ 0.45
CPSF4-209ENST00000465132 SUSD2Q9UGT4 822 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 XPO7Q9UIA9 1087 aaKnown RBP17.86■□□□□ 0.45
CPSF4-209ENST00000465132 MSRB2Q9Y3D2 182 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 CAPN6Q9Y6Q1 641 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 DOCK4Q8N1I0 1966 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 PCNX2A6NKB5 2137 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 TIMM44O43615 452 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 KDELR1P24390 212 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 CD6P30203 668 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 OR1E1P30953 314 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 IL12RB1P42701 662 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 TAS2R40P59535 323 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 ENPP2Q13822 863 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 TFDP2Q14188 446 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 CACNA1EQ15878 2313 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 GEN1Q17RS7 908 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 PLEKHG6Q3KR16 790 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 ZNF569Q5MCW4 686 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 WDR45BQ5MNZ6 344 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 MANEALQ5VSG8 457 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 BZW1Q7L1Q6 419 aaKnown RBP17.85■□□□□ 0.45
CPSF4-209ENST00000465132 CCDC50Q8IVM0 306 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 CARNMT1Q8N4J0 409 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 CEP192Q8TEP8 1941 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 UCMAQ8WVF2 138 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 HES6Q96HZ4 224 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 KCTD15Q96SI1 283 aaPredicted RBP17.85■□□□□ 0.45
CPSF4-209ENST00000465132 PCDH18Q9HCL0 1135 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 TMEM248Q9NWD8 314 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 KLK13Q9UKR3 277 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 EFR3BQ9Y2G0 817 aa17.85■□□□□ 0.45
CPSF4-209ENST00000465132 IGF2RP11717 2491 aa17.84■□□□□ 0.45
CPSF4-209ENST00000465132 WASH4PA8MWX3 477 aa17.84■□□□□ 0.45
CPSF4-209ENST00000465132 GJB3O75712 270 aa17.84■□□□□ 0.45
CPSF4-209ENST00000465132 TRIM16O95361 564 aa17.84■□□□□ 0.45
CPSF4-209ENST00000465132 GNSP15586 552 aa17.84■□□□□ 0.45
CPSF4-209ENST00000465132 MAOBP27338 520 aa17.84■□□□□ 0.45
CPSF4-209ENST00000465132 HOXD9P28356 352 aaPredicted RBP17.84■□□□□ 0.45
CPSF4-209ENST00000465132 YBEYP58557 167 aaPredicted RBP17.84■□□□□ 0.45
CPSF4-209ENST00000465132 RPS24P62847 133 aaKnown RBP17.84■□□□□ 0.45
CPSF4-209ENST00000465132 SLC14A1Q13336 389 aa17.84■□□□□ 0.45
CPSF4-209ENST00000465132 HNRNPDQ14103 355 aaKnown RBP17.84■□□□□ 0.45
CPSF4-209ENST00000465132 EIF4HQ15056 248 aaKnown RBP17.84■□□□□ 0.45
CPSF4-209ENST00000465132 TFDP3Q5H9I0 405 aa17.84■□□□□ 0.45
CPSF4-209ENST00000465132 MEI1Q5TIA1 1274 aa17.84■□□□□ 0.45
CPSF4-209ENST00000465132 TMCO3Q6UWJ1 677 aa17.84■□□□□ 0.45
CPSF4-209ENST00000465132 CYP4V2Q6ZWL3 525 aaPredicted RBP17.84■□□□□ 0.45
CPSF4-209ENST00000465132 CFAP52Q8N1V2 620 aa17.84■□□□□ 0.45
CPSF4-209ENST00000465132 PYROXD2Q8N2H3 581 aa17.84■□□□□ 0.45
CPSF4-209ENST00000465132 ZCCHC14Q8WYQ9 949 aaKnown RBP17.84■□□□□ 0.45
CPSF4-209ENST00000465132 IGSF8Q969P0 613 aa17.84■□□□□ 0.45
CPSF4-209ENST00000465132 TOE1Q96GM8 510 aaKnown RBP17.84■□□□□ 0.45
CPSF4-209ENST00000465132 PRICKLE1Q96MT3 831 aaPredicted RBP17.84■□□□□ 0.45
CPSF4-209ENST00000465132 MKRN2Q9H000 416 aaKnown RBP17.84■□□□□ 0.45
CPSF4-209ENST00000465132 ANLNQ9NQW6 1124 aa17.84■□□□□ 0.45
CPSF4-209ENST00000465132 ITM2CQ9NQX7 267 aa17.84■□□□□ 0.45
CPSF4-209ENST00000465132 TMPRSS4Q9NRS4 437 aa17.84■□□□□ 0.45
CPSF4-209ENST00000465132 GPATCH2LQ9NWQ4 482 aa17.84■□□□□ 0.45
CPSF4-209ENST00000465132 WSB2Q9NYS7 404 aaPredicted RBP17.84■□□□□ 0.45
CPSF4-209ENST00000465132 USP36Q9P275 1121 aaKnown RBP17.84■□□□□ 0.45
CPSF4-209ENST00000465132 HPCAL4Q9UM19 191 aa17.84■□□□□ 0.45
CPSF4-209ENST00000465132 TBC1D30Q9Y2I9 924 aa17.84■□□□□ 0.45
CPSF4-209ENST00000465132 ADAMTS9Q9P2N4 1935 aa17.84■□□□□ 0.45
CPSF4-209ENST00000465132 A0A0U1RQJ8 604 aa17.83■□□□□ 0.44
CPSF4-209ENST00000465132 ILVBLA1L0T0 632 aa17.83■□□□□ 0.44
CPSF4-209ENST00000465132 SRRM3A6NNA2 597 aaPredicted RBP17.83■□□□□ 0.44
CPSF4-209ENST00000465132 I6L893 689 aaPredicted RBP17.83■□□□□ 0.44
CPSF4-209ENST00000465132 KIF2AO00139 706 aaPredicted RBP17.83■□□□□ 0.44
CPSF4-209ENST00000465132 ZNF189O75820 626 aaPredicted RBP17.83■□□□□ 0.44
CPSF4-209ENST00000465132 FTCDO95954 541 aa17.83■□□□□ 0.44
CPSF4-209ENST00000465132 RHOCP08134 193 aa17.83■□□□□ 0.44
CPSF4-209ENST00000465132 TCF4P15884 667 aa17.83■□□□□ 0.44
CPSF4-209ENST00000465132 GOT1P17174 413 aa17.83■□□□□ 0.44
CPSF4-209ENST00000465132 GNG11P61952 73 aa17.83■□□□□ 0.44
CPSF4-209ENST00000465132 SULT2A1Q06520 285 aa17.83■□□□□ 0.44
CPSF4-209ENST00000465132 ANKS1BQ7Z6G8 1248 aa17.83■□□□□ 0.44
CPSF4-209ENST00000465132 C14orf80Q86SX3 495 aa17.83■□□□□ 0.44
CPSF4-209ENST00000465132 TMPRSS6Q8IU80 811 aa17.83■□□□□ 0.44
CPSF4-209ENST00000465132 LRRC49Q8IUZ0 686 aa17.83■□□□□ 0.44
CPSF4-209ENST00000465132 ZNF683Q8IZ20 524 aa17.83■□□□□ 0.44
CPSF4-209ENST00000465132 AHI1Q8N157 1196 aa17.83■□□□□ 0.44
CPSF4-209ENST00000465132 RTL3Q8N8U3 475 aaKnown RBP17.83■□□□□ 0.44
CPSF4-209ENST00000465132 DNASE2BQ8WZ79 361 aa17.83■□□□□ 0.44
CPSF4-209ENST00000465132 CSPG4P5Q96PW8 444 aa17.83■□□□□ 0.44
CPSF4-209ENST00000465132 MAGEH1Q9H213 219 aa17.83■□□□□ 0.44
CPSF4-209ENST00000465132 ELOVL2Q9NXB9 296 aa17.83■□□□□ 0.44
CPSF4-209ENST00000465132 CWC15Q9P013 229 aaKnown RBP17.83■□□□□ 0.44
CPSF4-209ENST00000465132 CLEC4EQ9ULY5 219 aa17.83■□□□□ 0.44
CPSF4-209ENST00000465132 HYOU1Q9Y4L1 999 aa17.83■□□□□ 0.44
CPSF4-209ENST00000465132 CXorf51AA0A1B0GTR3 108 aa17.82■□□□□ 0.44
CPSF4-209ENST00000465132 FAM221BA6H8Z2 402 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms