RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 ACADMP11310 421 aa18.03■□□□□ 0.48
VPS52-214ENST00000463486 PAPOLAP51003 745 aaKnown RBP18.03■□□□□ 0.48
VPS52-214ENST00000463486 CDH6P55285 790 aa18.03■□□□□ 0.48
VPS52-214ENST00000463486 SPEM2Q0P670 501 aa18.03■□□□□ 0.48
VPS52-214ENST00000463486 SPA17Q15506 151 aa18.03■□□□□ 0.48
VPS52-214ENST00000463486 INO80DQ53TQ3 878 aaPredicted RBP18.03■□□□□ 0.48
VPS52-214ENST00000463486 PEAR1Q5VY43 1037 aaPredicted RBP18.03■□□□□ 0.48
VPS52-214ENST00000463486 PCDH20Q8N6Y1 951 aaKnown RBP18.03■□□□□ 0.48
VPS52-214ENST00000463486 PCDH19Q8TAB3 1148 aa18.03■□□□□ 0.48
VPS52-214ENST00000463486 OR8D1Q8WZ84 308 aa18.03■□□□□ 0.48
VPS52-214ENST00000463486 FAF2Q96CS3 445 aa18.03■□□□□ 0.48
VPS52-214ENST00000463486 GPR174Q9BXC1 333 aa18.03■□□□□ 0.48
VPS52-214ENST00000463486 LACRTQ9GZZ8 138 aa18.03■□□□□ 0.48
VPS52-214ENST00000463486 GMEB2Q9UKD1 530 aa18.03■□□□□ 0.48
VPS52-214ENST00000463486 WASF2Q9Y6W5 498 aa18.03■□□□□ 0.48
VPS52-214ENST00000463486 DUSP10Q9Y6W6 482 aa18.03■□□□□ 0.48
VPS52-214ENST00000463486 DNAH14Q0VDD8 3507 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 ZSCAN5CA6NGD5 496 aaPredicted RBP18.02■□□□□ 0.48
VPS52-214ENST00000463486 C3orf70A6NLC5 250 aaPredicted RBP18.02■□□□□ 0.48
VPS52-214ENST00000463486 DAPK3O43293 454 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 PRAMEF11O60813 436 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 RNASEH1O60930 286 aaKnown RBP18.02■□□□□ 0.48
VPS52-214ENST00000463486 ADH1BP00325 375 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 C5AR1P21730 350 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 CHRNA3P32297 505 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 ARL4AP40617 200 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 SSR1P43307 286 aaKnown RBP18.02■□□□□ 0.48
VPS52-214ENST00000463486 PSMD8P48556 350 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 DHPSP49366 369 aaPredicted RBP18.02■□□□□ 0.48
VPS52-214ENST00000463486 CYTH1Q15438 398 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 CARD16Q5EG05 197 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 LRRC38Q5VT99 294 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 ARHGAP36Q6ZRI8 547 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 ARMCX6Q7L4S7 300 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 FAM124AQ86V42 546 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 LZTR1Q8N653 840 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 ACRBPQ8NEB7 543 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 TMIEQ8NEW7 156 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 CADM4Q8NFZ8 388 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 RAPGEF5Q92565 580 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 NEUROG2Q9H2A3 272 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 FBXL12Q9NXK8 326 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 DONSONQ9NYP3 566 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 PILRBQ9UKJ0 227 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 HPCAL4Q9UM19 191 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 HYOU1Q9Y4L1 999 aa18.02■□□□□ 0.48
VPS52-214ENST00000463486 METTL12A8MUP2 240 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 BTNL10A8MVZ5 291 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 PLK4O00444 970 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 PJA2O43164 708 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 BUB1O43683 1085 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 PEX11BO96011 259 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 IL1BP01584 269 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 KRT7P08729 469 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 COMTP21964 271 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 ITPKAP23677 461 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 MPLP40238 635 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 SLC1A1P43005 524 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 GEMIN4P57678 1058 aaKnown RBP18.01■□□□□ 0.47
VPS52-214ENST00000463486 ZNF33AQ06730 810 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 PDK2Q15119 407 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 CCDC6Q16204 474 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 CSRP2Q16527 193 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 PQLC3Q8N755 202 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 C1orf216Q8TAB5 229 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 PIP4K2CQ8TBX8 421 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 DNASE2BQ8WZ79 361 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 GOLPH3Q9H4A6 298 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 C6orf106Q9H6K1 298 aaPredicted RBP18.01■□□□□ 0.47
VPS52-214ENST00000463486 SEMA4GQ9NTN9 838 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 KLHL11Q9NVR0 708 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 ALG6Q9Y672 507 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 CEP192Q8TEP8 1941 aa18.01■□□□□ 0.47
VPS52-214ENST00000463486 A0A0U1RQJ8 604 aa18■□□□□ 0.47
VPS52-214ENST00000463486 A0A1W2PP55 124 aa18■□□□□ 0.47
VPS52-214ENST00000463486 RNASEH2AO75792 299 aaKnown RBP18■□□□□ 0.47
VPS52-214ENST00000463486 TMCC1O94876 653 aa18■□□□□ 0.47
VPS52-214ENST00000463486 GSRP00390 522 aa18■□□□□ 0.47
VPS52-214ENST00000463486 ZNF806P0C7X5 589 aa18■□□□□ 0.47
VPS52-214ENST00000463486 KDELR1P24390 212 aa18■□□□□ 0.47
VPS52-214ENST00000463486 CCNHP51946 323 aaPredicted RBP18■□□□□ 0.47
VPS52-214ENST00000463486 CREB5Q02930 508 aa18■□□□□ 0.47
VPS52-214ENST00000463486 KRT81Q14533 505 aa18■□□□□ 0.47
VPS52-214ENST00000463486 TTC31Q49AM3 519 aaPredicted RBP18■□□□□ 0.47
VPS52-214ENST00000463486 ANKRD20A8PQ5CZ79 823 aa18■□□□□ 0.47
VPS52-214ENST00000463486 LYSMD4Q5XG99 296 aa18■□□□□ 0.47
VPS52-214ENST00000463486 HDDC3Q8N4P3 179 aa18■□□□□ 0.47
VPS52-214ENST00000463486 TPCN2Q8NHX9 752 aa18■□□□□ 0.47
VPS52-214ENST00000463486 CASKIN2Q8WXE0 1202 aa18■□□□□ 0.47
VPS52-214ENST00000463486 ARRDC3Q96B67 414 aa18■□□□□ 0.47
VPS52-214ENST00000463486 HSPA12BQ96MM6 686 aa18■□□□□ 0.47
VPS52-214ENST00000463486 ORAI3Q9BRQ5 295 aa18■□□□□ 0.47
VPS52-214ENST00000463486 ZNF670Q9BS34 389 aa18■□□□□ 0.47
VPS52-214ENST00000463486 PCED1AQ9H1Q7 454 aa18■□□□□ 0.47
VPS52-214ENST00000463486 SMOC1Q9H4F8 434 aa18■□□□□ 0.47
VPS52-214ENST00000463486 SGK2Q9HBY8 427 aa18■□□□□ 0.47
VPS52-214ENST00000463486 LHX3Q9UBR4 397 aa18■□□□□ 0.47
VPS52-214ENST00000463486 FZD4Q9ULV1 537 aa18■□□□□ 0.47
VPS52-214ENST00000463486 DCHS1Q96JQ0 3298 aa17.99■□□□□ 0.47
VPS52-214ENST00000463486 ARHGAP42A6NI28 874 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms