RNA–Protein interactions for RNA: ENST00000462813.1

DCTN1-216, Transcript of dynactin subunit 1, human

TSL 1 (best)

Gene DCTN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-216	ENST00000462813	PTPRN2	Q92932	1015 aa		18.19	■□□□□ 0.5
DCTN1-216	ENST00000462813	OLFM3	Q96PB7	478 aa		18.19	■□□□□ 0.5
DCTN1-216	ENST00000462813	LRFN3	Q9BTN0	628 aa		18.19	■□□□□ 0.5
DCTN1-216	ENST00000462813	CEP44	Q9C0F1	390 aa		18.19	■□□□□ 0.5
DCTN1-216	ENST00000462813	NUMA1	Q14980	2115 aa		18.19	■□□□□ 0.5
DCTN1-216	ENST00000462813		A0A1W2PQF6	199 aa		18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	PPP1R12A	O14974	1030 aa	Predicted RBP	18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	SYNCRIP	O60506	623 aa	Known RBP	18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	SIN3B	O75182	1162 aa		18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	CCNC	P24863	283 aa		18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	CXCL12	P48061	93 aa		18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	DGKE	P52429	567 aa		18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	PPID	Q08752	370 aa	Known RBP	18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	KLF1	Q13351	362 aa	Predicted RBP	18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	CAMK2G	Q13555	558 aa	Predicted RBP	18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	NOMO1	Q15155	1222 aa		18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	INO80D	Q53TQ3	878 aa	Predicted RBP	18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	TMCO4	Q5TGY1	634 aa		18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	TIGD7	Q6NT04	549 aa	Predicted RBP	18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	MAMSTR	Q6ZN01	415 aa		18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813		Q6ZVU0	165 aa		18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	PCDH20	Q8N6Y1	951 aa	Known RBP	18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	CCNY	Q8ND76	341 aa		18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	TSGA13	Q96PP4	275 aa		18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	HHIP	Q96QV1	700 aa		18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	LGMN	Q99538	433 aa		18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	CD248	Q9HCU0	757 aa		18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	POLM	Q9NP87	494 aa	Predicted RBP	18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	PRSS16	Q9NQE7	514 aa		18.18	■□□□□ 0.5
DCTN1-216	ENST00000462813	TCRBV7S2A1N4T	A0A589	114 aa		18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	TCRBV21S2A2	A0A5A6	115 aa		18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	TARSL2	A2RTX5	802 aa	Known RBP	18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	LAMTOR5	O43504	91 aa		18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	BNIP3L	O60238	219 aa		18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	CEP104	O60308	925 aa		18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	PAPSS2	O95340	614 aa	Predicted RBP	18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	PEX11B	O96011	259 aa		18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	OTUD4	Q01804	1114 aa	Known RBP	18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	RFTN1	Q14699	578 aa	Predicted RBP	18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	LBR	Q14739	615 aa	Known RBP	18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	CYTH1	Q15438	398 aa		18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	C9orf64	Q5T6V5	341 aa		18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	SLC13A5	Q86YT5	568 aa	Predicted RBP	18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	C1orf210	Q8IVY1	113 aa		18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	CCDC13	Q8IYE1	715 aa		18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	ACTL9	Q8TC94	416 aa		18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	NSMCE1	Q8WV22	266 aa		18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	ISG20	Q96AZ6	181 aa	Known RBP	18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	PBK	Q96KB5	322 aa		18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	ZNF599	Q96NL3	588 aa		18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	OSBPL9	Q96SU4	736 aa		18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	NAPG	Q99747	312 aa	Predicted RBP	18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	TM6SF2	Q9BZW4	377 aa		18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	TNKS2	Q9H2K2	1166 aa		18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	PRMT8	Q9NR22	394 aa	Predicted RBP	18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	SNX12	Q9UMY4	172 aa		18.17	■□□□□ 0.5
DCTN1-216	ENST00000462813	ZNF821	O75541	412 aa	Predicted RBP	18.16	■□□□□ 0.5
DCTN1-216	ENST00000462813	RHOA	P61586	193 aa		18.16	■□□□□ 0.5
DCTN1-216	ENST00000462813	SLC10A7	Q0GE19	358 aa		18.16	■□□□□ 0.5
DCTN1-216	ENST00000462813	AP1B1	Q10567	949 aa		18.16	■□□□□ 0.5
DCTN1-216	ENST00000462813	B4GALNT4	Q76KP1	1039 aa		18.16	■□□□□ 0.5
DCTN1-216	ENST00000462813	ADAT2	Q7Z6V5	191 aa	Known RBP	18.16	■□□□□ 0.5
DCTN1-216	ENST00000462813	ZC3H18	Q86VM9	953 aa	Known RBP	18.16	■□□□□ 0.5
DCTN1-216	ENST00000462813	TTC13	Q8NBP0	860 aa		18.16	■□□□□ 0.5
DCTN1-216	ENST00000462813	TSTD1	Q8NFU3	115 aa		18.16	■□□□□ 0.5
DCTN1-216	ENST00000462813	FATE1	Q969F0	183 aa		18.16	■□□□□ 0.5
DCTN1-216	ENST00000462813	FAM118B	Q9BPY3	351 aa		18.16	■□□□□ 0.5
DCTN1-216	ENST00000462813	CINP	Q9BW66	212 aa	Predicted RBP	18.16	■□□□□ 0.5
DCTN1-216	ENST00000462813	BRD8	Q9H0E9	1235 aa		18.16	■□□□□ 0.5
DCTN1-216	ENST00000462813	LHX3	Q9UBR4	397 aa		18.16	■□□□□ 0.5
DCTN1-216	ENST00000462813	TNRC6B	Q9UPQ9	1833 aa	Known RBP	18.16	■□□□□ 0.5
DCTN1-216	ENST00000462813	CTAGE9	A4FU28	777 aa		18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813		K7ESF4	209 aa		18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813	MATN3	O15232	486 aa		18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813	FANCG	O15287	622 aa		18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813	COPA	P53621	1224 aa		18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813	ETF1	P62495	437 aa	Known RBP	18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813	ZNF33A	Q06730	810 aa		18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813	XRCC4	Q13426	336 aa		18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813	ZNF235	Q14590	738 aa		18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813	PRKD1	Q15139	912 aa	Predicted RBP	18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813	NYAP1	Q6ZVC0	841 aa		18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813	STK40	Q8N2I9	435 aa		18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813	OR2A12	Q8NGT7	310 aa		18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813	OR2T3	Q8NH03	318 aa		18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813	TFB1M	Q8WVM0	346 aa	Known RBP	18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813	MAML1	Q92585	1016 aa		18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813	CCDC114	Q96M63	670 aa		18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813	C16orf45	Q96MC5	204 aa	Predicted RBP	18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813	QKI	Q96PU8	341 aa	Known RBP eCLIP	18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813	FBRS	Q9HAH7	460 aa		18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813	SEPT3	Q9UH03	358 aa		18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813	R3HDM2	Q9Y2K5	976 aa	Known RBP	18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813	TP53BP1	Q12888	1972 aa	Predicted RBP	18.15	■□□□□ 0.5
DCTN1-216	ENST00000462813	HACD1	B0YJ81	288 aa		18.14	■□□□□ 0.49
DCTN1-216	ENST00000462813		H7C0C1	242 aa		18.14	■□□□□ 0.49
DCTN1-216	ENST00000462813	MCF2L	O15068	1137 aa		18.14	■□□□□ 0.49
DCTN1-216	ENST00000462813	ALDH1A2	O94788	518 aa		18.14	■□□□□ 0.49
DCTN1-216	ENST00000462813	APBB3	O95704	486 aa		18.14	■□□□□ 0.49
DCTN1-216	ENST00000462813	IGSF6	O95976	241 aa		18.14	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms