RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 TMEM139Q8IV31 216 aa12.32□□□□□ -0.44
HPS1-206ENST00000462743 SLC41A1Q8IVJ1 513 aa12.32□□□□□ -0.44
HPS1-206ENST00000462743 ARHGAP12Q8IWW6 846 aa12.32□□□□□ -0.44
HPS1-206ENST00000462743 TMEFF1Q8IYR6 380 aa12.32□□□□□ -0.44
HPS1-206ENST00000462743 HMCESQ96FZ2 354 aa12.32□□□□□ -0.44
HPS1-206ENST00000462743 LRIG1Q96JA1 1093 aa12.32□□□□□ -0.44
HPS1-206ENST00000462743 CSPG4P5Q96PW8 444 aa12.32□□□□□ -0.44
HPS1-206ENST00000462743 SLC39A8Q9C0K1 460 aa12.32□□□□□ -0.44
HPS1-206ENST00000462743 BTBD1Q9H0C5 482 aa12.32□□□□□ -0.44
HPS1-206ENST00000462743 KDM4CQ9H3R0 1056 aa12.32□□□□□ -0.44
HPS1-206ENST00000462743 VPS45Q9NRW7 570 aa12.32□□□□□ -0.44
HPS1-206ENST00000462743 SEMA4GQ9NTN9 838 aa12.32□□□□□ -0.44
HPS1-206ENST00000462743 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.32□□□□□ -0.44
HPS1-206ENST00000462743 PILRBQ9UKJ0 227 aa12.32□□□□□ -0.44
HPS1-206ENST00000462743 SARDHQ9UL12 918 aa12.32□□□□□ -0.44
HPS1-206ENST00000462743 TPX2Q9ULW0 747 aaKnown RBP12.32□□□□□ -0.44
HPS1-206ENST00000462743 DOCK9Q9BZ29 2069 aa12.32□□□□□ -0.44
HPS1-206ENST00000462743 PCNX2A6NKB5 2137 aa12.32□□□□□ -0.44
HPS1-206ENST00000462743 TRPM6Q9BX84 2022 aa12.32□□□□□ -0.44
HPS1-206ENST00000462743 ARHGAP42A6NI28 874 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 BTNL10A8MVZ5 291 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 ZNF487B1APH4 448 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 PJA2O43164 708 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 BUB1O43683 1085 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 PRAMEF11O60813 436 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 POP4O95707 220 aaKnown RBP12.31□□□□□ -0.44
HPS1-206ENST00000462743 GSRP00390 522 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 IL1BP01584 269 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 PRNPP04156 253 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 AMPD1P23109 780 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 ACSL1P33121 698 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 RECQLP46063 649 aaPredicted RBP12.31□□□□□ -0.44
HPS1-206ENST00000462743 DHPSP49366 369 aaPredicted RBP12.31□□□□□ -0.44
HPS1-206ENST00000462743 NUMBP49757 651 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 CDH6P55285 790 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 SPEM2Q0P670 501 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 SMTNL2Q2TAL5 461 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 WDR45BQ5MNZ6 344 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 RAD9BQ6WBX8 426 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 DPY19L3Q6ZPD9 716 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 CPNE8Q86YQ8 564 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 LRRC49Q8IUZ0 686 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 MAP7D3Q8IWC1 876 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 HDDC3Q8N4P3 179 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 AADATQ8N5Z0 425 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 PIP4K2CQ8TBX8 421 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 HSPH1Q92598 858 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 VOPP1Q96AW1 172 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 FAF2Q96CS3 445 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 BAG1Q99933 345 aaPredicted RBP12.31□□□□□ -0.44
HPS1-206ENST00000462743 HEPHQ9BQS7 1158 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 ZNF670Q9BS34 389 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 GPR174Q9BXC1 333 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 NEUROG2Q9H2A3 272 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 PDFQ9HBH1 243 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 EVLQ9UI08 416 aaPredicted RBP12.31□□□□□ -0.44
HPS1-206ENST00000462743 MFHAS1Q9Y4C4 1052 aa12.31□□□□□ -0.44
HPS1-206ENST00000462743 ASCC3Q8N3C0 2202 aaKnown RBP12.31□□□□□ -0.44
HPS1-206ENST00000462743 SOWAHDA6NJG2 315 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 PRR5-ARHGAP8B1AHC4 643 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 C1QTNF3-AMACRE9PGA6 284 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 SEMA4FO95754 770 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 CTSLP07711 333 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 KDELR1P24390 212 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 DRD3P35462 400 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 MPLP40238 635 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 CSNK1DP48730 415 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 PAPOLAP51003 745 aaKnown RBP12.3□□□□□ -0.44
HPS1-206ENST00000462743 SNRPD1P62314 119 aaKnown RBP12.3□□□□□ -0.44
HPS1-206ENST00000462743 ARHGAP8P85298 464 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 CREB5Q02930 508 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 IL10RBQ08334 325 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 CCDC15Q0P6D6 951 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 DPYSL3Q14195 570 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 RFTN1Q14699 578 aaPredicted RBP12.3□□□□□ -0.44
HPS1-206ENST00000462743 CYTH1Q15438 398 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 SYCP2LQ5T4T6 812 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 TMCO4Q5TGY1 634 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 LYSMD4Q5XG99 296 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 SLC23A3Q6PIS1 610 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 CYP2U1Q7Z449 544 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 RABEPKQ7Z6M1 372 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 CHST14Q8NCH0 376 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 OR2AP1Q8NGE2 309 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 C1orf216Q8TAB5 229 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 CEP76Q8TAP6 659 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 OMDQ99983 421 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 ETNK2Q9NVF9 386 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 REXO2Q9Y3B8 237 aaKnown RBP12.3□□□□□ -0.44
HPS1-206ENST00000462743 WASF2Q9Y6W5 498 aa12.3□□□□□ -0.44
HPS1-206ENST00000462743 MYO15AQ9UKN7 3530 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 A0A1W2PP55 124 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 LRRC72A6NJI9 287 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 GOLGA6L6A8MZA4 724 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 TMCC1O94876 653 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 IPO7O95373 1038 aaKnown RBP12.29□□□□□ -0.44
HPS1-206ENST00000462743 ITPKAP23677 461 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 SERPINB6P35237 376 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 SSR1P43307 286 aaKnown RBP12.29□□□□□ -0.44
HPS1-206ENST00000462743 PSMD8P48556 350 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms