RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 SENP6Q9GZR1 1112 aaPredicted RBP7.78□□□□□ -1.16
UBE4B-204ENST00000462658 ASB7Q9H672 318 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 NHEJ1Q9H9Q4 299 aaPredicted RBP7.78□□□□□ -1.16
UBE4B-204ENST00000462658 RRAGDQ9NQL2 400 aaPredicted RBP7.78□□□□□ -1.16
UBE4B-204ENST00000462658 TRMT1Q9NXH9 659 aaKnown RBP7.78□□□□□ -1.16
UBE4B-204ENST00000462658 ZIM2Q9NZV7 527 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 ZNF180Q9UJW8 692 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 AJAP1Q9UKB5 411 aaPredicted RBP7.78□□□□□ -1.16
UBE4B-204ENST00000462658 PIN4Q9Y237 131 aaKnown RBP7.78□□□□□ -1.16
UBE4B-204ENST00000462658 EPN1Q9Y6I3 576 aaPredicted RBP7.78□□□□□ -1.16
UBE4B-204ENST00000462658 MROH7Q68CQ1 1323 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 USP27XA6NNY8 438 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 CAPN14A8MX76 684 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 FOXN3O00409 490 aaPredicted RBP7.77□□□□□ -1.17
UBE4B-204ENST00000462658 NDUFA10O95299 355 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 PLEKP08567 350 aaPredicted RBP7.77□□□□□ -1.17
UBE4B-204ENST00000462658 CCDC175P0C221 793 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 TMEM191BP0C7N4 346 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 FERP16591 822 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 FPR1P21462 350 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 PIK3CAP42336 1068 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 TFAMQ00059 246 aaKnown RBP7.77□□□□□ -1.17
UBE4B-204ENST00000462658 KLHL30Q0D2K2 578 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 TRIM71Q2Q1W2 868 aaKnown RBP7.77□□□□□ -1.17
UBE4B-204ENST00000462658 TDRD12Q587J7 1177 aaKnown RBP7.77□□□□□ -1.17
UBE4B-204ENST00000462658 JADE1Q6IE81 842 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 TRAPPC11Q7Z392 1133 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 IRF2BP2Q7Z5L9 587 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 FMNL3Q8IVF7 1028 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 CD302Q8IX05 232 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 EFCAB13Q8IY85 973 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 JPH3Q8WXH2 748 aaPredicted RBP7.77□□□□□ -1.17
UBE4B-204ENST00000462658 FAM81BQ96LP2 452 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 ADOQ96SZ5 270 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 DESI2Q9BSY9 194 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 PI4K2AQ9BTU6 479 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 SEZ6LQ9BYH1 1024 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 TRIM6Q9C030 488 aaPredicted RBP7.77□□□□□ -1.17
UBE4B-204ENST00000462658 MTMR12Q9C0I1 747 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 TRPV6Q9H1D0 765 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 PLEKHA5Q9HAU0 1116 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 TCF7L1Q9HCS4 588 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 CNOT11Q9UKZ1 510 aaKnown RBP7.77□□□□□ -1.17
UBE4B-204ENST00000462658 OGDHLQ9ULD0 1010 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 ST3GAL5Q9UNP4 418 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 PPP2R2CQ9Y2T4 447 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 GIT1Q9Y2X7 761 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 BZW2Q9Y6E2 419 aaKnown RBP7.77□□□□□ -1.17
UBE4B-204ENST00000462658 LAMA3Q16787 3333 aa7.77□□□□□ -1.17
UBE4B-204ENST00000462658 EIF3CLB5ME19 914 aaKnown RBP7.76□□□□□ -1.17
UBE4B-204ENST00000462658 F8VZ95 297 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 CAND2O75155 1236 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 GFPT2O94808 682 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 TFRCP02786 760 aaKnown RBP7.76□□□□□ -1.17
UBE4B-204ENST00000462658 CCDC172P0C7W6 258 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 PNMA6AP0CW24 399 aaPredicted RBP7.76□□□□□ -1.17
UBE4B-204ENST00000462658 PRKCIP41743 596 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 MAGEA10P43363 369 aaPredicted RBP7.76□□□□□ -1.17
UBE4B-204ENST00000462658 CDK7P50613 346 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 KRT83P78385 493 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 GCNT1Q02742 428 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 TRPC3Q13507 836 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 FBXO47Q5MNV8 452 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 ZNF618Q5T7W0 954 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 TWF2Q6IBS0 349 aaKnown RBP7.76□□□□□ -1.17
UBE4B-204ENST00000462658 PDZD4Q76G19 769 aaPredicted RBP7.76□□□□□ -1.17
UBE4B-204ENST00000462658 ENOSF1Q7L5Y1 443 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 PALM2Q8IXS6 379 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 TTC9BQ8N6N2 239 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 ACRBPQ8NEB7 543 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 DIS3LQ8TF46 1054 aaKnown RBP7.76□□□□□ -1.17
UBE4B-204ENST00000462658 HDAC10Q969S8 669 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 PPP1R13BQ96KQ4 1090 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 EIF3CQ99613 913 aaKnown RBP7.76□□□□□ -1.17
UBE4B-204ENST00000462658 CPPED1Q9BRF8 314 aaPredicted RBP7.76□□□□□ -1.17
UBE4B-204ENST00000462658 IMPG2Q9BZV3 1241 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 GPR88Q9GZN0 384 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 KLC2Q9H0B6 622 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 CDH19Q9H159 772 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 HAUS4Q9H6D7 363 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 CHST12Q9NRB3 414 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 LANCL2Q9NS86 450 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 C1orf112Q9NSG2 853 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 ANKRD6Q9Y2G4 727 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 TCAF1Q9Y4C2 921 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 HES2Q9Y543 173 aa7.76□□□□□ -1.17
UBE4B-204ENST00000462658 TRIP12Q14669 1992 aaPredicted RBP7.75□□□□□ -1.17
UBE4B-204ENST00000462658 GOLGA6L9A6NEM1 432 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 OFD1O75665 1012 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 IPO7O95373 1038 aaKnown RBP7.75□□□□□ -1.17
UBE4B-204ENST00000462658 SGPL1O95470 568 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 ASS1P00966 412 aaKnown RBP7.75□□□□□ -1.17
UBE4B-204ENST00000462658 AMY1AP04745 511 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 KRT19P08727 400 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 GHRP10912 638 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 CKBP12277 381 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 HK1P19367 917 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 AKAP5P24588 427 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 PCSK1P29120 753 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 CD52P31358 61 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms