RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 SNAP47Q5SQN1 464 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 ACBD5Q5T8D3 534 aaPredicted RBP6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 TTC39BQ5VTQ0 682 aaPredicted RBP6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 HHATQ5VTY9 493 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 TTC19Q6DKK2 380 aaPredicted RBP6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 TAX1BP1Q86VP1 789 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 ERICH1Q86X53 443 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 CCNJLQ8IV13 435 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 MFN1Q8IWA4 741 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 CCDC170Q8IYT3 715 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 PPM1KQ8N3J5 372 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 ZCCHC9Q8N567 271 aaKnown RBP6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 TTC39CQ8N584 583 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 ZNF248Q8NDW4 579 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 OR13H1Q8NG92 308 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 MAGEC3Q8TD91 643 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 DNASE2BQ8WZ79 361 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 MRPS31Q92665 395 aaKnown RBP6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 N4BP2L2Q92802 583 aaPredicted RBP6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 NKD1Q969G9 470 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 OSBPL9Q96SU4 736 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 PNKPQ96T60 521 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 SEPT5Q99719 369 aaPredicted RBP6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 TUBB2BQ9BVA1 445 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 XPO4Q9C0E2 1151 aaKnown RBP6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 CEP44Q9C0F1 390 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 ZCWPW1Q9H0M4 648 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 SMYD3Q9H7B4 428 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 LIN7BQ9HAP6 207 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 CYP3A43Q9HB55 503 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 APOBEC3GQ9HC16 384 aaKnown RBP6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 HSFX1Q9UBD0 423 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 LIMA1Q9UHB6 759 aaKnown RBP6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 PPT2Q9UMR5 302 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 ICE1Q9Y2F5 2266 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 SETD2Q9BYW2 2564 aaPredicted RBP6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 OBSL1O75147 1896 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 NBASA2RRP1 2371 aa6.21□□□□□ -1.42
SMARCC1-204ENST00000462198 LRBAP50851 2863 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 BOD1L1Q8NFC6 3051 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 A0A1B0GTH6 734 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 A0A1B0GVT2 93 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 A0A1W2PNR3 127 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 SLC35F4A4IF30 521 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 A6NNZ2 444 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 LGALS16A8MUM7 142 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 KCNK3O14649 394 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 GABRDO14764 452 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 BCAT2O15382 392 aaPredicted RBP6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 SUV39H1O43463 412 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 HCRTO43612 131 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 AHCYL1O43865 530 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 RTN2O75298 545 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 NFATC1O95644 943 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 TUBBP07437 444 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 CELA2BP08218 269 aaPredicted RBP6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 CDK4P11802 303 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 HMGA1P17096 107 aaKnown RBP6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 ATF6P18850 670 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 SLC9A1P19634 815 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 LMO2P25791 158 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 OAS2P29728 719 aaKnown RBP6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 HNRNPH1P31943 449 aaKnown RBP6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 GCKP35557 465 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 WASP42768 502 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 GRK6P43250 576 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 LMAN1P49257 510 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 SESN3P58005 492 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 SRSF11Q05519 484 aaKnown RBP6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 CUL2Q13617 745 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 ZNF77Q15935 545 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 TUBB8Q3ZCM7 444 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 WLSQ5T9L3 541 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 SAMD5Q5TGI4 173 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 KIAA1614Q5VZ46 1190 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 HIST2H2BCQ6DN03 193 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 CCDC81Q6ZN84 652 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 MICALCLQ6ZW33 695 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 RRAGAQ7L523 313 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 LIMS2Q7Z4I7 341 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 OSTM1Q86WC4 334 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 TRIM42Q8IWZ5 723 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 DCP1BQ8IZD4 617 aaKnown RBP6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 ADGRG2Q8IZP9 1017 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 CEP112Q8N8E3 955 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 EXD3Q8N9H8 876 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 MSANTD4Q8NCY6 345 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 OR10T2Q8NGX3 314 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 LMO3Q8TAP4 145 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 KBTBD7Q8WVZ9 684 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 ERLEC1Q96DZ1 483 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 TNIP3Q96KP6 325 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 FAM81BQ96LP2 452 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 SLC22A12Q96S37 553 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 SYT15Q9BQS2 421 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 ACBD6Q9BR61 282 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 SDCBP2Q9H190 292 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 ZFYVE1Q9HBF4 777 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 UBE2TQ9NPD8 197 aaPredicted RBP6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 APEX2Q9UBZ4 518 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms