RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 ASCC3Q8N3C0 2202 aaKnown RBP15.71■□□□□ 0.11
VARS-219ENST00000461328 MCF2LO15068 1137 aa15.71■□□□□ 0.11
VARS-219ENST00000461328 GJB3O75712 270 aa15.71■□□□□ 0.11
VARS-219ENST00000461328 DRD3P35462 400 aa15.71■□□□□ 0.11
VARS-219ENST00000461328 ACVRL1P37023 503 aa15.71■□□□□ 0.11
VARS-219ENST00000461328 EIF4A3P38919 411 aaKnown RBP15.71■□□□□ 0.11
VARS-219ENST00000461328 GRIA4P48058 902 aa15.71■□□□□ 0.11
VARS-219ENST00000461328 SERPINH1P50454 418 aaKnown RBP15.71■□□□□ 0.11
VARS-219ENST00000461328 DNA2P51530 1060 aa15.71■□□□□ 0.11
VARS-219ENST00000461328 ADPRHP54922 357 aa15.71■□□□□ 0.11
VARS-219ENST00000461328 BNC1Q01954 994 aa15.71■□□□□ 0.11
VARS-219ENST00000461328 FOXC1Q12948 553 aa15.71■□□□□ 0.11
VARS-219ENST00000461328 POLD3Q15054 466 aaPredicted RBP15.71■□□□□ 0.11
VARS-219ENST00000461328 HLA-BQ31612 363 aa15.71■□□□□ 0.11
VARS-219ENST00000461328 ARTNQ5T4W7 220 aa15.71■□□□□ 0.11
VARS-219ENST00000461328 ALKBH5Q6P6C2 394 aaKnown RBP15.71■□□□□ 0.11
VARS-219ENST00000461328 RTL3Q8N8U3 475 aaKnown RBP15.71■□□□□ 0.11
VARS-219ENST00000461328 OR8K1Q8NGG5 319 aa15.71■□□□□ 0.11
VARS-219ENST00000461328 CNTNAP3BQ96NU0 1288 aa15.71■□□□□ 0.11
VARS-219ENST00000461328 SNRNP25Q9BV90 132 aaKnown RBP15.71■□□□□ 0.11
VARS-219ENST00000461328 CNTNAP3Q9BZ76 1288 aa15.71■□□□□ 0.11
VARS-219ENST00000461328 TNKS2Q9H2K2 1166 aa15.71■□□□□ 0.11
VARS-219ENST00000461328 NDFIP2Q9NV92 336 aa15.71■□□□□ 0.11
VARS-219ENST00000461328 TBC1D3DA0A087WVF3 549 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 TBC1D3IA0A087WXS9 549 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 TBC1D3EA0A087X179 549 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 TBC1D3KA0A087X1G2 549 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 SPAARA0A1B0GVQ0 90 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 A0A1W2PPC4 97 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 TBC1D3FA6NER0 549 aaPredicted RBP15.7■□□□□ 0.1
VARS-219ENST00000461328 TBC1D3LB9A6J9 549 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 EEF2KO00418 725 aaKnown RBP15.7■□□□□ 0.1
VARS-219ENST00000461328 PLK4O00444 970 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 FGF10O15520 208 aaPredicted RBP15.7■□□□□ 0.1
VARS-219ENST00000461328 DAPK3O43293 454 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 TBC1D3HP0C7X1 549 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 MIPP30301 263 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 CCR5P51681 352 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 METAP1P53582 386 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 GEMIN4P57678 1058 aaKnown RBP15.7■□□□□ 0.1
VARS-219ENST00000461328 SIM1P81133 766 aaPredicted RBP15.7■□□□□ 0.1
VARS-219ENST00000461328 KIF19Q2TAC6 998 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 ERMARDQ5T6L9 678 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 TBC1D3GQ6DHY5 549 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 TBC1D3CQ6IPX1 549 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 LAYNQ6UX15 382 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 NAXDQ8IW45 347 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 TBC1D3Q8IZP1 549 aaPredicted RBP15.7■□□□□ 0.1
VARS-219ENST00000461328 PIP4K2CQ8TBX8 421 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 SLC6A18Q96N87 628 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 PEBP4Q96S96 227 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 NCAPGQ9BPX3 1015 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 NUP85Q9BW27 656 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 TRIM5Q9C035 493 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 MAGEH1Q9H213 219 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 IL21RQ9HBE5 538 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 DYRK4Q9NR20 520 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 ANAPC7Q9UJX3 599 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 SARDHQ9UL12 918 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 PPM1HQ9ULR3 514 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 ANKRD6Q9Y2G4 727 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 FNDC3AQ9Y2H6 1198 aaKnown RBP15.7■□□□□ 0.1
VARS-219ENST00000461328 SNX11Q9Y5W9 270 aa15.7■□□□□ 0.1
VARS-219ENST00000461328 CACNA1EQ15878 2313 aa15.69■□□□□ 0.1
VARS-219ENST00000461328 KPNA3O00505 521 aaPredicted RBP15.69■□□□□ 0.1
VARS-219ENST00000461328 SLC7A4O43246 635 aa15.69■□□□□ 0.1
VARS-219ENST00000461328 SMAD6O43541 496 aaKnown RBP15.69■□□□□ 0.1
VARS-219ENST00000461328 AKR1B10O60218 316 aa15.69■□□□□ 0.1
VARS-219ENST00000461328 SH3BP5O60239 455 aa15.69■□□□□ 0.1
VARS-219ENST00000461328 MFAP3LO75121 409 aa15.69■□□□□ 0.1
VARS-219ENST00000461328 HNRNPH3P31942 346 aaKnown RBP15.69■□□□□ 0.1
VARS-219ENST00000461328 HTR7P34969 479 aa15.69■□□□□ 0.1
VARS-219ENST00000461328 C21orf59P57076 290 aa15.69■□□□□ 0.1
VARS-219ENST00000461328 RACK1P63244 317 aaKnown RBP15.69■□□□□ 0.1
VARS-219ENST00000461328 ARF5P84085 180 aa15.69■□□□□ 0.1
VARS-219ENST00000461328 SHC2P98077 582 aa15.69■□□□□ 0.1
VARS-219ENST00000461328 SLC20A2Q08357 652 aa15.69■□□□□ 0.1
VARS-219ENST00000461328 HNRNPDQ14103 355 aaKnown RBP15.69■□□□□ 0.1
VARS-219ENST00000461328 PPP6R3Q5H9R7 873 aaPredicted RBP15.69■□□□□ 0.1
VARS-219ENST00000461328 RYBPQ8N488 228 aaPredicted RBP15.69■□□□□ 0.1
VARS-219ENST00000461328 OR2A12Q8NGT7 310 aa15.69■□□□□ 0.1
VARS-219ENST00000461328 GRIN3AQ8TCU5 1115 aa15.69■□□□□ 0.1
VARS-219ENST00000461328 ARHGEF2Q92974 986 aaKnown RBP15.69■□□□□ 0.1
VARS-219ENST00000461328 CAMK1GQ96NX5 476 aa15.69■□□□□ 0.1
VARS-219ENST00000461328 DNAJC7Q99615 494 aa15.69■□□□□ 0.1
VARS-219ENST00000461328 ORAI3Q9BRQ5 295 aa15.69■□□□□ 0.1
VARS-219ENST00000461328 ACE2Q9BYF1 805 aaPredicted RBP15.69■□□□□ 0.1
VARS-219ENST00000461328 CEP44Q9C0F1 390 aa15.69■□□□□ 0.1
VARS-219ENST00000461328 AASDHPPTQ9NRN7 309 aa15.69■□□□□ 0.1
VARS-219ENST00000461328 TM7SF3Q9NS93 570 aa15.69■□□□□ 0.1
VARS-219ENST00000461328 ABHD10Q9NUJ1 306 aa15.69■□□□□ 0.1
VARS-219ENST00000461328 DONSONQ9NYP3 566 aa15.69■□□□□ 0.1
VARS-219ENST00000461328 TPX2Q9ULW0 747 aaKnown RBP15.69■□□□□ 0.1
VARS-219ENST00000461328 FCF1Q9Y324 198 aaKnown RBP15.69■□□□□ 0.1
VARS-219ENST00000461328 PCDHB9Q9Y5E1 797 aa15.69■□□□□ 0.1
VARS-219ENST00000461328 DOCK4Q8N1I0 1966 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 EIF3CLB5ME19 914 aaKnown RBP15.68■□□□□ 0.1
VARS-219ENST00000461328 PLRG1O43660 514 aaKnown RBP15.68■□□□□ 0.1
VARS-219ENST00000461328 LRCH4O75427 683 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 ZMPSTE24O75844 475 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms