RNA–Protein interactions for RNA: ENST00000460621.6

VAMP7-203, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-203ENST00000460621 NDFIP2Q9NV92 336 aa11.18□□□□□ -0.62
VAMP7-203ENST00000460621 KLHL11Q9NVR0 708 aa11.18□□□□□ -0.62
VAMP7-203ENST00000460621 TMEM59LQ9UK28 342 aa11.18□□□□□ -0.62
VAMP7-203ENST00000460621 PNMA8BQ9ULN7 279 aaPredicted RBP11.18□□□□□ -0.62
VAMP7-203ENST00000460621 TPX2Q9ULW0 747 aaKnown RBP11.18□□□□□ -0.62
VAMP7-203ENST00000460621 AK5Q9Y6K8 562 aa11.18□□□□□ -0.62
VAMP7-203ENST00000460621 KALRNO60229 2985 aa11.18□□□□□ -0.62
VAMP7-203ENST00000460621 COL27A1Q8IZC6 1860 aaPredicted RBP11.17□□□□□ -0.62
VAMP7-203ENST00000460621 GTPBP10A4D1E9 387 aaKnown RBP11.17□□□□□ -0.62
VAMP7-203ENST00000460621 POM121BA6NF01 834 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 C1QTNF3-AMACRE9PGA6 284 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 FFAR2O15552 330 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 SPINT1O43278 529 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 LEFTY1O75610 366 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 PIAS2O75928 621 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 NEBLO76041 1014 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 MT-CO3P00414 261 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 RHOCP08134 193 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 GKP32189 559 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 SULT1E1P49888 294 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 OXCT1P55809 520 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 ARF5P84085 180 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 PTK2Q05397 1052 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 OVGP1Q12889 678 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 ILKQ13418 452 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 FZD2Q14332 565 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 C22orf39Q6P5X5 142 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 ERN2Q76MJ5 926 aaKnown RBP11.17□□□□□ -0.62
VAMP7-203ENST00000460621 TMC6Q7Z403 805 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 DSG4Q86SJ6 1040 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 CACTIN-AS1Q8N1I8 211 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 OXR1Q8N573 874 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 OR4C6Q8NH72 309 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 GRIN3AQ8TCU5 1115 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 PGAP3Q96FM1 320 aaPredicted RBP11.17□□□□□ -0.62
VAMP7-203ENST00000460621 KLF6Q99612 283 aaPredicted RBP11.17□□□□□ -0.62
VAMP7-203ENST00000460621 NAA15Q9BXJ9 866 aaKnown RBP11.17□□□□□ -0.62
VAMP7-203ENST00000460621 HDAC8Q9BY41 377 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 WDCPQ9H6R7 721 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.17□□□□□ -0.62
VAMP7-203ENST00000460621 GGT7Q9UJ14 662 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 CLCA2Q9UQC9 943 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 FHOD1Q9Y613 1164 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 TRPM6Q9BX84 2022 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 DOCK4Q8N1I0 1966 aa11.17□□□□□ -0.62
VAMP7-203ENST00000460621 SETXQ7Z333 2677 aaKnown RBP11.16□□□□□ -0.62
VAMP7-203ENST00000460621 PMS2P1A4D2B8 440 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 FAM72CH0Y354 149 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 PAK4O96013 591 aaPredicted RBP11.16□□□□□ -0.62
VAMP7-203ENST00000460621 CDK4P11802 303 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 CYP11B1P15538 503 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 KRT9P35527 623 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 HNF1BP35680 557 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 NUDT1P36639 197 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 ACVRL1P37023 503 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 DRAP1Q14919 205 aaPredicted RBP11.16□□□□□ -0.62
VAMP7-203ENST00000460621 SLC25A52Q3SY17 297 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 HSP90AA4PQ58FG1 418 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 BRMS1LQ5PSV4 323 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 FAM72AQ5TYM5 149 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 TAF3Q5VWG9 929 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 FAM72DQ6L9T8 149 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 NEK5Q6P3R8 708 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 Q6ZSR6 202 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 PHLDB2Q86SQ0 1253 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 NOP9Q86U38 636 aaKnown RBP11.16□□□□□ -0.62
VAMP7-203ENST00000460621 FAM72BQ86X60 149 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 DCAF4L2Q8NA75 395 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 FGF11Q92914 225 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 APOLD1Q96LR9 279 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 C1orf74Q96LT6 269 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 CFAP57Q96MR6 1250 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 FCF1Q9Y324 198 aaKnown RBP11.16□□□□□ -0.62
VAMP7-203ENST00000460621 FADS3Q9Y5Q0 445 aa11.16□□□□□ -0.62
VAMP7-203ENST00000460621 FLNBO75369 2602 aaKnown RBP11.16□□□□□ -0.62
VAMP7-203ENST00000460621 ZNF462Q96JM2 2506 aa11.15□□□□□ -0.62
VAMP7-203ENST00000460621 K7ESM1 405 aa11.15□□□□□ -0.62
VAMP7-203ENST00000460621 OPA1O60313 960 aa11.15□□□□□ -0.62
VAMP7-203ENST00000460621 SRGAP2O75044 1071 aa11.15□□□□□ -0.62
VAMP7-203ENST00000460621 PCDH8O95206 1070 aa11.15□□□□□ -0.62
VAMP7-203ENST00000460621 GJB6O95452 261 aa11.15□□□□□ -0.62
VAMP7-203ENST00000460621 FGFR1OPO95684 399 aaKnown RBP11.15□□□□□ -0.62
VAMP7-203ENST00000460621 CKMT1AP12532 417 aa11.15□□□□□ -0.62
VAMP7-203ENST00000460621 CHRNB2P17787 502 aa11.15□□□□□ -0.62
VAMP7-203ENST00000460621 ITIH2P19823 946 aa11.15□□□□□ -0.62
VAMP7-203ENST00000460621 HNRNPA2B1P22626 353 aaKnown RBP11.15□□□□□ -0.62
VAMP7-203ENST00000460621 ABL2P42684 1182 aa11.15□□□□□ -0.62
VAMP7-203ENST00000460621 KRT83P78385 493 aa11.15□□□□□ -0.62
VAMP7-203ENST00000460621 TLE3Q04726 772 aa11.15□□□□□ -0.62
VAMP7-203ENST00000460621 DEUP1Q05D60 604 aa11.15□□□□□ -0.62
VAMP7-203ENST00000460621 CCDC173Q0VFZ6 552 aa11.15□□□□□ -0.62
VAMP7-203ENST00000460621 TBC1D25Q3MII6 688 aa11.15□□□□□ -0.62
VAMP7-203ENST00000460621 KLHDC7AQ5VTJ3 777 aa11.15□□□□□ -0.62
VAMP7-203ENST00000460621 NYAP1Q6ZVC0 841 aa11.15□□□□□ -0.62
VAMP7-203ENST00000460621 PARS2Q7L3T8 475 aaKnown RBP11.15□□□□□ -0.62
VAMP7-203ENST00000460621 SETD3Q86TU7 594 aaPredicted RBP11.15□□□□□ -0.62
VAMP7-203ENST00000460621 FAM131BQ86XD5 332 aa11.15□□□□□ -0.62
VAMP7-203ENST00000460621 SPACA3Q8IXA5 215 aa11.15□□□□□ -0.62
VAMP7-203ENST00000460621 EMC1Q8N766 993 aa11.15□□□□□ -0.62
VAMP7-203ENST00000460621 NETO2Q8NC67 525 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms