RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.67□□□□□ -1.82
RFC4-211ENST00000460408 SPAG4Q9NPE6 437 aa3.67□□□□□ -1.82
RFC4-211ENST00000460408 PAPOLBQ9NRJ5 636 aaKnown RBP3.67□□□□□ -1.82
RFC4-211ENST00000460408 PPP1R14DQ9NXH3 145 aa3.67□□□□□ -1.82
RFC4-211ENST00000460408 HCN3Q9P1Z3 774 aa3.67□□□□□ -1.82
RFC4-211ENST00000460408 NLKQ9UBE8 527 aa3.67□□□□□ -1.82
RFC4-211ENST00000460408 IPO11Q9UI26 975 aaKnown RBP3.67□□□□□ -1.82
RFC4-211ENST00000460408 AGO2Q9UKV8 859 aaKnown RBP3.67□□□□□ -1.82
RFC4-211ENST00000460408 SLC8A2Q9UPR5 921 aa3.67□□□□□ -1.82
RFC4-211ENST00000460408 NAALADL1Q9UQQ1 740 aa3.67□□□□□ -1.82
RFC4-211ENST00000460408 LAMP3Q9UQV4 416 aa3.67□□□□□ -1.82
RFC4-211ENST00000460408 MST1RQ04912 1400 aa3.67□□□□□ -1.82
RFC4-211ENST00000460408 ZNF521Q96K83 1311 aa3.67□□□□□ -1.82
RFC4-211ENST00000460408 KIR2DS5A0A0G2JLQ3 304 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 C17orf113A0A1B0GUU1 675 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.66□□□□□ -1.82
RFC4-211ENST00000460408 A0A1W2PQM1 296 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 TARSL2A2RTX5 802 aaKnown RBP3.66□□□□□ -1.82
RFC4-211ENST00000460408 KIR2DS3K7RE56 304 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 TNPO2O14787 897 aaKnown RBP3.66□□□□□ -1.82
RFC4-211ENST00000460408 SPTLC2O15270 562 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 TNFSF14O43557 240 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 TMEM63AO94886 807 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 ADAP00813 363 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 CBSLP0DN79 551 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 CAPN3P20807 821 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 HOXD9P28356 352 aaPredicted RBP3.66□□□□□ -1.82
RFC4-211ENST00000460408 EPHA8P29322 1005 aaPredicted RBP3.66□□□□□ -1.82
RFC4-211ENST00000460408 CCKBRP32239 447 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 CBSP35520 551 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 CDH15P55291 814 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 GEMIN4P57678 1058 aaKnown RBP3.66□□□□□ -1.82
RFC4-211ENST00000460408 GHRHRQ02643 423 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 ETFDHQ16134 617 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 ZNF667Q5HYK9 610 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 MORN5Q5VZ52 161 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 TTLL5Q6EMB2 1281 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 ISM2Q6H9L7 571 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 SLC18B1Q6NT16 456 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 FAM180BQ6P0A1 224 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 DSTYKQ6XUX3 929 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 CYB5R4Q7L1T6 521 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 YTHDF3Q7Z739 585 aaKnown RBP3.66□□□□□ -1.82
RFC4-211ENST00000460408 TBC1D1Q86TI0 1168 aaPredicted RBP3.66□□□□□ -1.82
RFC4-211ENST00000460408 TRIM74Q86UV6 250 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 TRIM73Q86UV7 250 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 ADGRF4Q8IZF3 695 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 TNIP2Q8NFZ5 429 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 FAR1Q8WVX9 515 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 C7orf26Q96N11 449 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 TEFMQ96QE5 360 aaKnown RBP3.66□□□□□ -1.82
RFC4-211ENST00000460408 WACQ9BTA9 647 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 PRSS22Q9GZN4 317 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 USP44Q9H0E7 712 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 HIPK3Q9H422 1215 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 CXorf56Q9H5V9 222 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 ATP8A2Q9NTI2 1148 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 GRHL1Q9NZI5 618 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 FBXO40Q9UH90 709 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 UTS2RQ9UKP6 389 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 CNPY2Q9Y2B0 182 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 ZNF335Q9H4Z2 1342 aaPredicted RBP3.66□□□□□ -1.82
RFC4-211ENST00000460408 KDM3AQ9Y4C1 1321 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 ERCC6Q03468 1493 aa3.66□□□□□ -1.82
RFC4-211ENST00000460408 F5H0A9 414 aaPredicted RBP3.65□□□□□ -1.83
RFC4-211ENST00000460408 F8W810 466 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 RHODO00212 210 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 TLX3O43711 291 aaPredicted RBP3.65□□□□□ -1.83
RFC4-211ENST00000460408 STRNO43815 780 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 TLR2O60603 784 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 UGDHO60701 494 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 RTN3O95197 1032 aaPredicted RBP3.65□□□□□ -1.83
RFC4-211ENST00000460408 NTN1O95631 604 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 SERPINC1P01008 464 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 LCKP06239 509 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 ARHGAP25P42331 645 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 CYP2J2P51589 502 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 FHL1Q13642 323 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 TSTQ16762 297 aaKnown RBP3.65□□□□□ -1.83
RFC4-211ENST00000460408 SYTL3Q4VX76 610 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 FAAH2Q6GMR7 532 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 SLC22A25Q6T423 547 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 WDR5BQ86VZ2 330 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 CPXM2Q8N436 756 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 SPATA3Q8NHX4 192 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 NFKBIDQ8NI38 313 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 HSPH1Q92598 858 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 HDAC2Q92769 488 aaKnown RBP3.65□□□□□ -1.83
RFC4-211ENST00000460408 EME1Q96AY2 570 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 MSI2Q96DH6 328 aaKnown RBP3.65□□□□□ -1.83
RFC4-211ENST00000460408 NR1H4Q96RI1 486 aaPredicted RBP3.65□□□□□ -1.83
RFC4-211ENST00000460408 IFT27Q9BW83 186 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 ZHX3Q9H4I2 956 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 ACTR5Q9H9F9 607 aaPredicted RBP3.65□□□□□ -1.83
RFC4-211ENST00000460408 SMC4Q9NTJ3 1288 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 TMEM184CQ9NVA4 438 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 TMEM45AQ9NWC5 275 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 DHDHQ9UQ10 334 aa3.65□□□□□ -1.83
RFC4-211ENST00000460408 TTBK1Q5TCY1 1321 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms