RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 SH3BP1Q9Y3L3 701 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 ANKRD36A6QL64 1941 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 KIAA1549LQ6ZVL6 1849 aa8.91□□□□□ -0.98
RIF1-208ENST00000457745 A0A1B0GVM2 712 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 TCAF2A6NFQ2 919 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 MATN3O15232 486 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 CHADO15335 359 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 INSIG1O15503 277 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 RIPK2O43353 540 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 OPHN1O60890 802 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 RAMP2O60895 175 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 ERLIN1O75477 346 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 ACSL3O95573 720 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 LATS1O95835 1130 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 PENKP01210 267 aaPredicted RBP8.9□□□□□ -0.98
RIF1-208ENST00000457745 CYP17A1P05093 508 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 APRTP07741 180 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 RHOCP08134 193 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 CCNB1P14635 433 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 FSHRP23945 695 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 CCNCP24863 283 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 GCAP28676 217 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 SERPINB6P35237 376 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 ELK3P41970 407 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 PMS2P54278 862 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 ZNF844Q08AG5 666 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 PDIA2Q13087 525 aaKnown RBP8.9□□□□□ -0.98
RIF1-208ENST00000457745 CALCOCO2Q13137 446 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 MORF4L2Q15014 288 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 POLD3Q15054 466 aaPredicted RBP8.9□□□□□ -0.98
RIF1-208ENST00000457745 CTC1Q2NKJ3 1217 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 BBS9Q3SYG4 887 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 FUT11Q495W5 492 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 TTMPQ5BVD1 217 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 LY6G5CQ5SRR4 150 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 TMEM215Q68D42 235 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 TANGO2Q6ICL3 276 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 DENND5AQ6IQ26 1287 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 ARHGEF18Q6ZSZ5 1173 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 RTL10Q7L3V2 364 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 CPXM2Q8N436 756 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 TEX26Q8N6G2 289 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 HJURPQ8NCD3 748 aaPredicted RBP8.9□□□□□ -0.98
RIF1-208ENST00000457745 ANKK1Q8NFD2 765 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 OR52K1Q8NGK4 314 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 EPS8L3Q8TE67 593 aaKnown RBP8.9□□□□□ -0.98
RIF1-208ENST00000457745 UBLCP1Q8WVY7 318 aaPredicted RBP8.9□□□□□ -0.98
RIF1-208ENST00000457745 LRRC45Q96CN5 670 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 PABPC5Q96DU9 382 aaKnown RBP8.9□□□□□ -0.98
RIF1-208ENST00000457745 EXOC2Q96KP1 924 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 SIGLEC10Q96LC7 697 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 ASB16Q96NS5 453 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 RBM15Q96T37 977 aaKnown RBP eCLIP8.9□□□□□ -0.98
RIF1-208ENST00000457745 SPON2Q9BUD6 331 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 POMKQ9H5K3 350 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 GLOD4Q9HC38 313 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 HPS4Q9NQG7 708 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 SMYD2Q9NRG4 433 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 RBM22Q9NW64 420 aaKnown RBP eCLIP8.9□□□□□ -0.98
RIF1-208ENST00000457745 ARGLU1Q9NWB6 273 aaPredicted RBP8.9□□□□□ -0.98
RIF1-208ENST00000457745 LHX3Q9UBR4 397 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 CTNNAL1Q9UBT7 734 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 RSPH14Q9UHP6 348 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 VPS51Q9UID3 782 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 CHMP2BQ9UQN3 213 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 RAD54BQ9Y620 910 aa8.9□□□□□ -0.98
RIF1-208ENST00000457745 A0A0U1RQS6 177 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 E2F8A0AVK6 867 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 SMAD6O43541 496 aaKnown RBP8.89□□□□□ -0.99
RIF1-208ENST00000457745 KDELR3O43731 214 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 CLDN11O75508 207 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 AGTP01019 485 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 PRKCGP05129 697 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 TUBBP07437 444 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 TPH1P17752 444 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 TPSB2P20231 275 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 MX2P20592 715 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 SP100P23497 879 aaPredicted RBP8.89□□□□□ -0.99
RIF1-208ENST00000457745 MCM3P25205 808 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 MGAT1P26572 445 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 HLA-FP30511 346 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 SSTR1P30872 391 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 ADRA1AP35348 466 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 AVPR1AP37288 418 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 MAGEA4P43358 317 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 SLC6A11P48066 632 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 STK19P49842 368 aaPredicted RBP8.89□□□□□ -0.99
RIF1-208ENST00000457745 PTPN5P54829 565 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 SKOR1P84550 965 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 PPARDQ03181 441 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 TNK2Q07912 1038 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 IL10RBQ08334 325 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 MSLNQ13421 630 aaPredicted RBP8.89□□□□□ -0.99
RIF1-208ENST00000457745 SLC29A2Q14542 456 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 COL19A1Q14993 1142 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 TPSAB1Q15661 275 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 PARP6Q2NL67 630 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 ARHGAP15Q53QZ3 475 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 RABGAP1LQ5R372 815 aa8.89□□□□□ -0.99
RIF1-208ENST00000457745 CES3Q6UWW8 571 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms