RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	SRRT	Q9BXP5	876 aa	Known RBP	13.5	□□□□□ -0.25
SNHG17-208	ENST00000456953	WDR70	Q9NW82	654 aa		13.5	□□□□□ -0.25
SNHG17-208	ENST00000456953	ACSL6	Q9UKU0	697 aa		13.5	□□□□□ -0.25
SNHG17-208	ENST00000456953	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.5	□□□□□ -0.25
SNHG17-208	ENST00000456953	HS3ST3A1	Q9Y663	406 aa		13.5	□□□□□ -0.25
SNHG17-208	ENST00000456953	BIN1	O00499	593 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	KPNA3	O00505	521 aa	Predicted RBP	13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	PLD2	O14939	933 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	SART1	O43290	800 aa	Known RBP	13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	NOBOX	O60393	691 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	LETM1	O95202	739 aa	Predicted RBP	13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	PCDH8	O95206	1070 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	PAEP	P09466	180 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	SLC5A2	P31639	672 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	EIF3I	Q13347	325 aa	Known RBP	13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	UBAP2L	Q14157	1087 aa	Known RBP	13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	SPIDR	Q14159	915 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	DEFB133	Q30KQ1	61 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	TMEM259	Q4ZIN3	620 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	RABGAP1L	Q5R372	815 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	SEL1L3	Q68CR1	1132 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	OR6B2	Q6IFH4	312 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	CXorf57	Q6NSI4	855 aa	Known RBP	13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	CRTC1	Q6UUV9	634 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	BEND5	Q7L4P6	421 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	C14orf80	Q86SX3	495 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	CIR1	Q86X95	450 aa	Predicted RBP	13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	SH2D3C	Q8N5H7	860 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	TMIE	Q8NEW7	156 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	TFAP2B	Q92481	460 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	GLMN	Q92990	594 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	RNF34	Q969K3	372 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	ALG14	Q96F25	216 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	BMF	Q96LC9	184 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	CCDC114	Q96M63	670 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	FEM1A	Q9BSK4	669 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	TRIM62	Q9BVG3	475 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	GTPBP4	Q9BZE4	634 aa	Known RBP	13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	MIS12	Q9H081	205 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	DYRK4	Q9NR20	520 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	MAN1B1	Q9UKM7	699 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	ZFR2	Q9UPR6	939 aa	Known RBP	13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	NAALADL1	Q9UQQ1	740 aa		13.49	□□□□□ -0.25
SNHG17-208	ENST00000456953	POM121B	A6NF01	834 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953		M0QYV0	167 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	MUSK	O15146	869 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	BNIP3L	O60238	219 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	PPFIA2	O75334	1257 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	RHOBTB3	O94955	611 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	CTSL	P07711	333 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	CHRNA3	P32297	505 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	RABIF	P47224	123 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	TLE1	Q04724	770 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	STIL	Q15468	1287 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	CNGA2	Q16280	664 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	PERM1	Q5SV97	790 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	ISM2	Q6H9L7	571 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	SASS6	Q6UVJ0	657 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	UBR7	Q8N806	425 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	SPATA20	Q8TB22	786 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	LMX1A	Q8TE12	382 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	FAM149B1	Q96BN6	582 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	IL12RB2	Q99665	862 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	PRMT1	Q99873	361 aa	Known RBP	13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	BOC	Q9BWV1	1114 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	HDAC8	Q9BY41	377 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	KLF15	Q9UIH9	416 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	VPS28	Q9UK41	221 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	COQ4	Q9Y3A0	265 aa		13.48	□□□□□ -0.25
SNHG17-208	ENST00000456953	KCNU1	A8MYU2	1149 aa		13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	PRNP	P04156	253 aa		13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	JUND	P17535	347 aa		13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	TBXAS1	P24557	533 aa	Predicted RBP	13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	RPS21	P63220	83 aa	Known RBP	13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	DRAP1	Q14919	205 aa	Predicted RBP	13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	TGIF1	Q15583	401 aa		13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	CBWD6	Q4V339	395 aa		13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	ZCWPW2	Q504Y3	356 aa		13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	CBWD3	Q5JTY5	395 aa		13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	CBWD5	Q5RIA9	395 aa		13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	SYPL2	Q5VXT5	272 aa		13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	KIAA1161	Q6NSJ0	714 aa		13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	ERN2	Q76MJ5	926 aa	Known RBP	13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	JAML	Q86YT9	394 aa		13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	GUF1	Q8N442	669 aa	Known RBP	13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	FBXO39	Q8N4B4	442 aa		13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	ATP6V0D2	Q8N8Y2	350 aa		13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	OR2A12	Q8NGT7	310 aa		13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	BTN2A2	Q8WVV5	523 aa		13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	SLC17A9	Q9BYT1	436 aa		13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	SLC12A6	Q9UHW9	1150 aa		13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	IPO11	Q9UI26	975 aa	Known RBP	13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	MAPK8IP1	Q9UQF2	711 aa		13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	HS3ST2	Q9Y278	367 aa		13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	OR51B4	Q9Y5P0	310 aa		13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	TRPM6	Q9BX84	2022 aa		13.47	□□□□□ -0.25
SNHG17-208	ENST00000456953	SPTBN1	Q01082	2364 aa	Known RBP	13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	TMX2-CTNND1	H3BSU7	103 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms