RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 DPY30Q9C005 99 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 IRF2BPLQ9H1B7 796 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 OLA1Q9NTK5 396 aaKnown RBP5.07□□□□□ -1.6
PCDH9-203ENST00000456367 TRMT13Q9NUP7 481 aaKnown RBP5.07□□□□□ -1.6
PCDH9-203ENST00000456367 ZNF219Q9P2Y4 722 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-203ENST00000456367 TCHHQ07283 1943 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 ARPC4-TTLL3A0A0A6YYG9 625 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 SIGLEC16A6NMB1 481 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 ZNF99A8MXY4 864 aaPredicted RBP5.06□□□□□ -1.6
PCDH9-203ENST00000456367 ZW10O43264 779 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 ORC5O43913 435 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 TADA2AO75478 443 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 UPP2O95045 317 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 TPSB2P20231 275 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 SCNN1DP51172 638 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 HNRNPFP52597 415 aaKnown RBP5.06□□□□□ -1.6
PCDH9-203ENST00000456367 ATN1P54259 1190 aaPredicted RBP5.06□□□□□ -1.6
PCDH9-203ENST00000456367 NME3Q13232 169 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 TPSAB1Q15661 275 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 HLFQ16534 295 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 PLEKHG6Q3KR16 790 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 TTLL9Q3SXZ7 439 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 C6orf183Q5T699 404 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 OR52E8Q6IFG1 317 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 SWSAP1Q6NVH7 229 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 CASP12Q6UXS9 341 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 USP43Q70EL4 1123 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 CBWD2Q8IUF1 395 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 AFG1LQ8WV93 481 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 LPGAT1Q92604 370 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 C12orf43Q96C57 262 aaKnown RBP5.06□□□□□ -1.6
PCDH9-203ENST00000456367 ASB9Q96DX5 294 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 POP1Q99575 1024 aaKnown RBP5.06□□□□□ -1.6
PCDH9-203ENST00000456367 HNRNPABQ99729 332 aaKnown RBP5.06□□□□□ -1.6
PCDH9-203ENST00000456367 IL22Q9GZX6 179 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 PIDD1Q9HB75 910 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 CHST12Q9NRB3 414 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 CLN6Q9NWW5 311 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 BTG4Q9NY30 223 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 SSR3Q9UNL2 185 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 B3GNT3Q9Y2A9 372 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 PCDHB12Q9Y5F1 795 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 PCDHGA3Q9Y5H0 932 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 LOC100506127A0A0U1RQW1 187 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 WDR27A2RRH5 827 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 GSAPA4D1B5 854 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 PRMT5O14744 637 aaPredicted RBP5.06□□□□□ -1.6
PCDH9-203ENST00000456367 KCNH1O95259 989 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 ZNF682O95780 498 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 IL1BP01584 269 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 TSPAN19P0C672 248 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 GRIA4P48058 902 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 ACOT2P49753 483 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 NAGLUP54802 743 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 FMO1Q01740 532 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 DLG1Q12959 904 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 MAMLD1Q13495 774 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 ZNF284Q2VY69 593 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 KLHL35Q6PF15 583 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 CNSTQ6PJW8 725 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 FAM92BQ6ZTR7 304 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 SPATA19Q7Z5L4 167 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 STX12Q86Y82 276 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 THEM5Q8N1Q8 247 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 CBR4Q8N4T8 237 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 FAR1Q8WVX9 515 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 CERS2Q96G23 380 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 CBWD1Q9BRT8 395 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 MMTAG2Q9BU76 263 aaKnown RBP5.06□□□□□ -1.6
PCDH9-203ENST00000456367 COQ10BQ9H8M1 238 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 ZNF224Q9NZL3 707 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 SUCOQ9UBS9 1254 aaKnown RBP5.06□□□□□ -1.6
PCDH9-203ENST00000456367 SRP68Q9UHB9 627 aaKnown RBP5.06□□□□□ -1.6
PCDH9-203ENST00000456367 PPM1HQ9ULR3 514 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 ERGIC3Q9Y282 383 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 NWD1Q149M9 1564 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 DISP2A7MBM2 1401 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 ZNF335Q9H4Z2 1342 aaPredicted RBP5.06□□□□□ -1.6
PCDH9-203ENST00000456367 FAM240BA0A1B0GVZ2 78 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 UBE2QL1A1L167 161 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 G3V2T6 193 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 PSMD11O00231 422 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 ASS1P00966 412 aaKnown RBP5.06□□□□□ -1.6
PCDH9-203ENST00000456367 MYL3P08590 195 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 FGFR2P21802 821 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 AKAP5P24588 427 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 PSMA3P25788 255 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 ABL2P42684 1182 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 GLRBP48167 497 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 PIK3CGP48736 1102 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 MARCKSL1P49006 195 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 ENTPD1P49961 510 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 VASPP50552 380 aaPredicted RBP5.06□□□□□ -1.6
PCDH9-203ENST00000456367 SLC7A2P52569 658 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 MTM1Q13496 603 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 TCEAL1Q15170 157 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 KIZQ2M2Z5 673 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 RNASEH2BQ5TBB1 312 aaKnown RBP5.06□□□□□ -1.6
PCDH9-203ENST00000456367 FAM91A1Q658Y4 838 aa5.06□□□□□ -1.6
PCDH9-203ENST00000456367 SLC9A4Q6AI14 798 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms