RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 ZBTB14O43829 449 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 PEX1O43933 1283 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 NPHS1O60500 1241 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 DDHD2O94830 711 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 JCHAINP01591 159 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 SLC35E2BP0CK96 405 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 THRAP10827 490 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 TYMPP19971 482 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 RGS2P41220 211 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 ARCN1P48444 511 aaKnown RBP12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 CLCN2P51788 898 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 SESN3P58005 492 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 DNAJB13P59910 316 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 SLC25A3Q00325 362 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 DSG1Q02413 1049 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 TNK2Q07912 1038 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 DSC3Q14574 896 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 GRM3Q14832 879 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 TIGD5Q53EQ6 642 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 KIAA0930Q6ICG6 404 aaPredicted RBP12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 OR52E8Q6IFG1 317 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 TIGD7Q6NT04 549 aaPredicted RBP12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 CD300LGQ6UXG3 332 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 METTL23Q86XA0 190 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 TMEM126BQ8IUX1 230 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 KIRREL3Q8IZU9 778 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 ZNF781Q8N8C0 355 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 ADAM32Q8TC27 787 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 DTX3LQ8TDB6 740 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 SOCS4Q8WXH5 440 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 SPDL1Q96EA4 605 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 RANBP9Q96S59 729 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 ECSITQ9BQ95 431 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 SYT17Q9BSW7 474 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 MTG1Q9BT17 334 aaPredicted RBP12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 PPP1R12CQ9BZL4 782 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 PRKD2Q9BZL6 878 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 UBE2OQ9C0C9 1292 aaKnown RBP12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 SMOC2Q9H3U7 446 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 CATSPERBQ9H7T0 1116 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 IARS2Q9NSE4 1012 aaKnown RBP12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 TLK1Q9UKI8 766 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 TCAF1Q9Y4C2 921 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 NYNRINQ9P2P1 1898 aaKnown RBP12.71□□□□□ -0.37
ECHDC1-209ENST00000454591 MEIS3P2A8K0S8 358 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 GPR182O15218 404 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 ATP9BO43861 1147 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 MAFKO60675 156 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 AKR1A1P14550 325 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 SP100P23497 879 aaPredicted RBP12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 RPL14P50914 215 aaKnown RBP12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 KPNA2P52292 529 aaKnown RBP12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 IRF9Q00978 393 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 NSUN2Q08J23 767 aaKnown RBP eCLIP12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 GRIK3Q13003 919 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 CCNIQ14094 377 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 RFTN1Q14699 578 aaPredicted RBP12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 SLC14A2Q15849 920 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 SLC9B1Q4ZJI4 515 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 KIAA0408Q6ZU52 694 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 DHDDSQ86SQ9 333 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 SERINC5Q86VE9 423 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 FBXW8Q8N3Y1 598 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 C2orf69Q8N8R5 385 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 TDRD5Q8NAT2 981 aaKnown RBP12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 RP9Q8TA86 221 aaKnown RBP12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 MAPK15Q8TD08 544 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 PPP2R3CQ969Q6 453 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 AZIN2Q96A70 460 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 LENG1Q96BZ8 264 aaPredicted RBP12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 TSNARE1Q96NA8 513 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 GPR78Q96P69 363 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 TCF7L2Q9NQB0 619 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 ABCC13Q9NSE7 274 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 TREX1Q9NSU2 369 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 SPATS2LQ9NUQ6 558 aaKnown RBP12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 IL1RAPL1Q9NZN1 696 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 PDP2Q9P2J9 529 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 SCOCQ9UIL1 159 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 PPM1HQ9ULR3 514 aa12.71□□□□□ -0.38
ECHDC1-209ENST00000454591 A0A087X1B8 175 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 RGSL1A5PLK6 1076 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 TNFRSF10BO14763 440 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 GRID2O43424 1007 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 AHSGP02765 367 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 PAX7P23759 505 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 GABRB3P28472 473 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 SCNN1GP51170 649 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 BEX3Q00994 111 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 SATB1Q01826 763 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 DLG2Q15700 870 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 CFAP157Q5JU67 520 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 LRRC8EQ6NSJ5 796 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 MSANTD2Q6P1R3 559 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 TMEM154Q6P9G4 183 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 RANBP10Q6VN20 620 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 FRMD7Q6ZUT3 714 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 KBTBD6Q86V97 674 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 TNS4Q8IZW8 715 aa12.7□□□□□ -0.38
ECHDC1-209ENST00000454591 CENPLQ8N0S6 344 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms