RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 SIRPGQ9P1W8 387 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 FCF1Q9Y324 198 aaKnown RBP6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 OR51B4Q9Y5P0 310 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ANKRD36A6QL64 1941 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 LRP4O75096 1905 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 DOCK4Q8N1I0 1966 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 A6NNZ2 444 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 E9PAM4 449 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PRAMEF26H0Y7S4 382 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 M0QYT0 321 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PSMA7O14818 248 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SLC7A4O43246 635 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SART1O43290 800 aaKnown RBP6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SLC28A2O43868 658 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 DAB1O75553 588 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 LEFTY1O75610 366 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CKMT1AP12532 417 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 HGFP14210 728 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 HNRNPA2B1P22626 353 aaKnown RBP6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 AKT2P31751 481 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CCR1P32246 355 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CHRNA3P32297 505 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 NNMTP40261 264 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 RPL34P49207 117 aaKnown RBP6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SULT1E1P49888 294 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 DNA2P51530 1060 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 RNASE9P60153 205 aaKnown RBP6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 YWHAZP63104 245 aaKnown RBP6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CDK17Q00537 523 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 GCNT1Q02742 428 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ZNF177Q13360 481 aaPredicted RBP6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 C1orf61Q13536 156 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PDE1CQ14123 709 aaPredicted RBP6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ZSCAN23Q3MJ62 389 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 TMEM259Q4ZIN3 620 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ARSIQ5FYB1 569 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 C6orf132Q5T0Z8 1188 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 FAM46CQ5VWP2 391 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CDCP2Q5VXM1 449 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 KCTD16Q68DU8 428 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 TRNP1Q6NT89 227 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 DPY19L3Q6ZPD9 716 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 Q6ZSR6 202 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 B3GNT8Q7Z7M8 397 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 DSG4Q86SJ6 1040 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 IQCHQ86VS3 1027 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SFTPA2Q8IWL1 248 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 TRIM59Q8IWR1 403 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 DRC7Q8IY82 874 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 WDTC1Q8N5D0 677 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ATP6V0D2Q8N8Y2 350 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ZNF557Q8N988 423 aaPredicted RBP6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 KYQ8NBH2 561 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ZNF248Q8NDW4 579 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 LMX1AQ8TE12 382 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 TTC9Q92623 222 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 AZIN2Q96A70 460 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 FAXDC2Q96IV6 333 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SLC2A13Q96QE2 648 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 FOXP3Q9BZS1 431 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ZDHHC6Q9H6R6 413 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ERVMER34-1Q9H9K5 563 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 METTL14Q9HCE5 456 aaKnown RBP6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PREBQ9HCU5 417 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 UBE2TQ9NPD8 197 aaPredicted RBP6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 RMND1Q9NWS8 449 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 DMTF1Q9Y222 760 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 HS3ST2Q9Y278 367 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 LRRK1Q38SD2 2015 aa6.13□□□□□ -1.43
HLA-DPA3-207ENST00000454398 IGLON5A6NGN9 336 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 GOLGA8SH3BPF8 625 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ERVH48-1M5A8F1 160 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 TK2O00142 265 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 MCF2LO15068 1137 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 HSF2BPO75031 334 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ZNF821O75541 412 aaPredicted RBP6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 GCATO75600 419 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 GJB6O95452 261 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 AFPP02771 609 aaKnown RBP6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ADRB3P13945 408 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 NME1P15531 152 aaKnown RBP6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SLC9A1P19634 815 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 IGFALSP35858 605 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 FLT3P36888 993 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CCNHP51946 323 aaPredicted RBP6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ARF5P84085 180 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SPTBN1Q01082 2364 aaKnown RBP6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 NOTCH2Q04721 2471 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SULT2A1Q06520 285 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CLN3Q13286 438 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ILKQ13418 452 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 STILQ15468 1287 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 TGIF1Q15583 401 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ISXQ2M1V0 245 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 HS1BP3Q53T59 392 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 HSP90AA4PQ58FG1 418 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ATXN7L2Q5T6C5 722 aaPredicted RBP6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 TTC39BQ5VTQ0 682 aaPredicted RBP6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 TAF3Q5VWG9 929 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms