RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 DCLK1O15075 740 aa16.18■□□□□ 0.18
SNX17-204ENST00000453453 ZNF189O75820 626 aaPredicted RBP16.18■□□□□ 0.18
SNX17-204ENST00000453453 ZWINTO95229 277 aa16.18■□□□□ 0.18
SNX17-204ENST00000453453 CREB1P16220 341 aa16.18■□□□□ 0.18
SNX17-204ENST00000453453 FOXN2P32314 431 aa16.18■□□□□ 0.18
SNX17-204ENST00000453453 ATP5OP48047 213 aa16.18■□□□□ 0.18
SNX17-204ENST00000453453 PAFAH1B3Q15102 231 aaKnown RBP16.18■□□□□ 0.18
SNX17-204ENST00000453453 KYNUQ16719 465 aa16.18■□□□□ 0.18
SNX17-204ENST00000453453 ADGRF1Q5T601 910 aa16.18■□□□□ 0.18
SNX17-204ENST00000453453 NPNTQ6UXI9 565 aa16.18■□□□□ 0.18
SNX17-204ENST00000453453 GSTA5Q7RTV2 222 aa16.18■□□□□ 0.18
SNX17-204ENST00000453453 CDKL3Q8IVW4 592 aaPredicted RBP16.18■□□□□ 0.18
SNX17-204ENST00000453453 KIRREL3Q8IZU9 778 aa16.18■□□□□ 0.18
SNX17-204ENST00000453453 LZTR1Q8N653 840 aa16.18■□□□□ 0.18
SNX17-204ENST00000453453 FAM13CQ8NE31 585 aa16.18■□□□□ 0.18
SNX17-204ENST00000453453 SLC35B2Q8TB61 432 aa16.18■□□□□ 0.18
SNX17-204ENST00000453453 RPRD1AQ96P16 312 aaPredicted RBP16.18■□□□□ 0.18
SNX17-204ENST00000453453 VCXQ9H320 206 aa16.18■□□□□ 0.18
SNX17-204ENST00000453453 CFAP97Q9P2B7 532 aa16.18■□□□□ 0.18
SNX17-204ENST00000453453 SAE1Q9UBE0 346 aaPredicted RBP16.18■□□□□ 0.18
SNX17-204ENST00000453453 STOML1Q9UBI4 398 aa16.18■□□□□ 0.18
SNX17-204ENST00000453453 DNPEPQ9ULA0 475 aa16.18■□□□□ 0.18
SNX17-204ENST00000453453 CHKBQ9Y259 395 aa16.18■□□□□ 0.18
SNX17-204ENST00000453453 DRG1Q9Y295 367 aaKnown RBP16.18■□□□□ 0.18
SNX17-204ENST00000453453 DOCK4Q8N1I0 1966 aa16.18■□□□□ 0.18
SNX17-204ENST00000453453 CHD7Q9P2D1 2997 aa16.18■□□□□ 0.18
SNX17-204ENST00000453453 NUP210Q8TEM1 1887 aaPredicted RBP16.17■□□□□ 0.18
SNX17-204ENST00000453453 NCAM2O15394 837 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 MOSPD3O75425 235 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 SNUPNO95149 360 aaKnown RBP16.17■□□□□ 0.18
SNX17-204ENST00000453453 GLP2RO95838 553 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 ITGAVP06756 1048 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 GSTA2P09210 222 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 RBP3P10745 1247 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 RHOQP17081 205 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 PTPN4P29074 926 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 WDR4P57081 412 aaKnown RBP16.17■□□□□ 0.18
SNX17-204ENST00000453453 KLC1Q07866 573 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 ADAM15Q13444 863 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 NADSYN1Q6IA69 706 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 FBXL22Q6P050 247 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 DARS2Q6PI48 645 aaKnown RBP16.17■□□□□ 0.18
SNX17-204ENST00000453453 GPR149Q86SP6 731 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 C14orf80Q86SX3 495 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 SRRM1Q8IYB3 904 aaKnown RBP16.17■□□□□ 0.18
SNX17-204ENST00000453453 LGI2Q8N0V4 545 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 TTC16Q8NEE8 873 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 C10orf82Q8WW14 230 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 ERP27Q96DN0 273 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 FERMT1Q9BQL6 677 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 RETREG1Q9H6L5 497 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 KIF9Q9HAQ2 790 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 ETNK2Q9NVF9 386 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 SLC24A2Q9UI40 661 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 GGT7Q9UJ14 662 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 AGO1Q9UL18 857 aaKnown RBP16.17■□□□□ 0.18
SNX17-204ENST00000453453 PHTF1Q9UMS5 762 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 TRANK1O15050 2925 aa16.17■□□□□ 0.18
SNX17-204ENST00000453453 RANBP2P49792 3224 aaKnown RBP16.17■□□□□ 0.18
SNX17-204ENST00000453453 IGLV3-10A0A075B6K4 115 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 TYW5A2RUC4 315 aaKnown RBP16.16■□□□□ 0.18
SNX17-204ENST00000453453 CFAP69A5D8W1 941 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 RASA4BC9J798 803 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 LEFTY2O00292 366 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 LINC01565O15544 149 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 RASA4O43374 803 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 MFSD11O43934 449 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 CEBPBP17676 345 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 MX2P20592 715 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 FSHRP23945 695 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 GBE1Q04446 702 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 PDK1Q15118 436 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 TTC39BQ5VTQ0 682 aaPredicted RBP16.16■□□□□ 0.18
SNX17-204ENST00000453453 ANO7Q6IWH7 933 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 CES5AQ6NT32 575 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 EP400NLQ6ZTU2 488 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 ZC3H18Q86VM9 953 aaKnown RBP16.16■□□□□ 0.18
SNX17-204ENST00000453453 RTL3Q8N8U3 475 aaKnown RBP16.16■□□□□ 0.18
SNX17-204ENST00000453453 RSAD2Q8WXG1 361 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 ING5Q8WYH8 240 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 NUDCD1Q96RS6 583 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 CCDC28BQ9BUN5 200 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 TTYH1Q9H313 450 aaPredicted RBP16.16■□□□□ 0.18
SNX17-204ENST00000453453 DTLQ9NZJ0 730 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 TRIM33Q9UPN9 1127 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 DRGXA6NNA5 263 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 WASH4PA8MWX3 477 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 HACD1B0YJ81 288 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 SGK1O00141 431 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 KLKB1P03952 638 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 ADCY8P40145 1251 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 OCRLQ01968 901 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 ROR2Q01974 943 aaKnown RBP16.16■□□□□ 0.18
SNX17-204ENST00000453453 GRIN2CQ14957 1233 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 OASLQ15646 514 aaKnown RBP16.16■□□□□ 0.18
SNX17-204ENST00000453453 SLC30A9Q6PML9 568 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 HTR3DQ70Z44 454 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 LRRC8CQ8TDW0 803 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 DNAJC9Q8WXX5 260 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 SLC7A6OSQ96CW6 309 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms