RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 STAP1Q9ULZ2 295 aa11.95□□□□□ -0.5
GARNL3-210ENST00000453030 PCDHB1Q9Y5F3 818 aa11.95□□□□□ -0.5
GARNL3-210ENST00000453030 RAI2Q9Y5P3 530 aa11.95□□□□□ -0.5
GARNL3-210ENST00000453030 GTPBP10A4D1E9 387 aaKnown RBP11.94□□□□□ -0.5
GARNL3-210ENST00000453030 PIAS2O75928 621 aa11.94□□□□□ -0.5
GARNL3-210ENST00000453030 PRNPP04156 253 aa11.94□□□□□ -0.5
GARNL3-210ENST00000453030 MYF5P13349 255 aa11.94□□□□□ -0.5
GARNL3-210ENST00000453030 CLCN1P35523 988 aa11.94□□□□□ -0.5
GARNL3-210ENST00000453030 RECQLP46063 649 aaPredicted RBP11.94□□□□□ -0.5
GARNL3-210ENST00000453030 CXCR3P49682 368 aa11.94□□□□□ -0.5
GARNL3-210ENST00000453030 SNX16P57768 344 aa11.94□□□□□ -0.5
GARNL3-210ENST00000453030 DEUP1Q05D60 604 aa11.94□□□□□ -0.5
GARNL3-210ENST00000453030 ZNF211Q13398 564 aaPredicted RBP11.94□□□□□ -0.5
GARNL3-210ENST00000453030 CAMK4Q16566 473 aa11.94□□□□□ -0.5
GARNL3-210ENST00000453030 ZNF542PQ5EBM4 170 aa11.94□□□□□ -0.5
GARNL3-210ENST00000453030 ARSIQ5FYB1 569 aa11.94□□□□□ -0.5
GARNL3-210ENST00000453030 ERN2Q76MJ5 926 aaKnown RBP11.94□□□□□ -0.5
GARNL3-210ENST00000453030 ZNF683Q8IZ20 524 aa11.94□□□□□ -0.5
GARNL3-210ENST00000453030 SLC22A18ASQ8N1D0 253 aa11.94□□□□□ -0.5
GARNL3-210ENST00000453030 DCBLD1Q8N8Z6 715 aa11.94□□□□□ -0.5
GARNL3-210ENST00000453030 ZNF397Q8NF99 534 aaPredicted RBP11.94□□□□□ -0.5
GARNL3-210ENST00000453030 TBCBQ99426 244 aa11.94□□□□□ -0.5
GARNL3-210ENST00000453030 PDCL3Q9H2J4 239 aa11.94□□□□□ -0.5
GARNL3-210ENST00000453030 PRORYQ9H606 182 aa11.94□□□□□ -0.5
GARNL3-210ENST00000453030 KLHL11Q9NVR0 708 aa11.94□□□□□ -0.5
GARNL3-210ENST00000453030 IL36AQ9UHA7 158 aa11.94□□□□□ -0.5
GARNL3-210ENST00000453030 ZFR2Q9UPR6 939 aaKnown RBP11.94□□□□□ -0.5
GARNL3-210ENST00000453030 ZNF462Q96JM2 2506 aa11.94□□□□□ -0.5
GARNL3-210ENST00000453030 ANKRD36A6QL64 1941 aa11.94□□□□□ -0.5
GARNL3-210ENST00000453030 FLNBO75369 2602 aaKnown RBP11.93□□□□□ -0.5
GARNL3-210ENST00000453030 A6NNZ2 444 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 GOLGA8SH3BPF8 625 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 FOXN3O00409 490 aaPredicted RBP11.93□□□□□ -0.5
GARNL3-210ENST00000453030 SRGAP2O75044 1071 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 LEFTY1O75610 366 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 NEBLO76041 1014 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 MT-CO3P00414 261 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 OR1E1P30953 314 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 CLCN6P51797 869 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 CCDC15Q0P6D6 951 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 RAPGEF1Q13905 1077 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 TPD52L1Q16890 204 aaPredicted RBP11.93□□□□□ -0.5
GARNL3-210ENST00000453030 TBC1D25Q3MII6 688 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 C2CD6Q53TS8 623 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 TAF3Q5VWG9 929 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 NEK5Q6P3R8 708 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 LRRC31Q6UY01 552 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 DPY19L3Q6ZPD9 716 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 SETD3Q86TU7 594 aaPredicted RBP11.93□□□□□ -0.5
GARNL3-210ENST00000453030 IRF2BP1Q8IU81 584 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 ZDHHC17Q8IUH5 632 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 TMIEQ8NEW7 156 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 SLC39A7Q92504 469 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 FGF11Q92914 225 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 NAF1Q96HR8 494 aaKnown RBP11.93□□□□□ -0.5
GARNL3-210ENST00000453030 PPP1R16AQ96I34 528 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 LGMNQ99538 433 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 SPON2Q9BUD6 331 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 DNAJC28Q9NX36 388 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 RRN3Q9NYV6 651 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 KIAA1468Q9P260 1216 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 COL6A6A6NMZ7 2263 aa11.93□□□□□ -0.5
GARNL3-210ENST00000453030 C1QL1O75973 258 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 ZIC2O95409 532 aaPredicted RBP11.92□□□□□ -0.5
GARNL3-210ENST00000453030 MPOP05164 745 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 GIMD1P0DJR0 217 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 ALPPL2P10696 532 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 ACTN2P35609 894 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 FLT3P36888 993 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 SERPINH1P50454 418 aaKnown RBP11.92□□□□□ -0.5
GARNL3-210ENST00000453030 DNA2P51530 1060 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 CCNHP51946 323 aaPredicted RBP11.92□□□□□ -0.5
GARNL3-210ENST00000453030 NEK3P51956 506 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 E2F1Q01094 437 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 MAN2A1Q16706 1144 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 TMEM259Q4ZIN3 620 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 HSP90AA4PQ58FG1 418 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 TRNP1Q6NT89 227 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 Q6ZSR6 202 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 PARS2Q7L3T8 475 aaKnown RBP11.92□□□□□ -0.5
GARNL3-210ENST00000453030 ABI3BPQ7Z7G0 1075 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 ERICH1Q86X53 443 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 FAM131BQ86XD5 332 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 SPACA3Q8IXA5 215 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 DRC7Q8IY82 874 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 TMEM35BQ8NCS4 154 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 PGAP3Q96FM1 320 aaPredicted RBP11.92□□□□□ -0.5
GARNL3-210ENST00000453030 HDAC8Q9BY41 377 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 TM6SF2Q9BZW4 377 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 ZDHHC6Q9H6R6 413 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 ATP13A1Q9HD20 1204 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 FCF1Q9Y324 198 aaKnown RBP11.92□□□□□ -0.5
GARNL3-210ENST00000453030 PAXBP1Q9Y5B6 917 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 FHOD1Q9Y613 1164 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 ACTL7AQ9Y615 435 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 WASF2Q9Y6W5 498 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 LRP4O75096 1905 aa11.92□□□□□ -0.5
GARNL3-210ENST00000453030 IGLV3-10A0A075B6K4 115 aa11.91□□□□□ -0.5
GARNL3-210ENST00000453030 POM121BA6NF01 834 aa11.91□□□□□ -0.5
GARNL3-210ENST00000453030 DRGXA6NNA5 263 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms