RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 REM2Q8IYK8 340 aaPredicted RBP11.97□□□□□ -0.49
VTA1-203ENST00000452973 FCRL5Q96RD9 977 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 SIRPGQ9P1W8 387 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 DCDC2Q9UHG0 476 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 PDE4DIPQ5VU43 2346 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 FRMPD3Q5JV73 1810 aa11.97□□□□□ -0.49
VTA1-203ENST00000452973 A0A096LPK6 155 aa11.96□□□□□ -0.49
VTA1-203ENST00000452973 MAGEB16A2A368 324 aa11.96□□□□□ -0.49
VTA1-203ENST00000452973 CFAP73A6NFT4 308 aa11.96□□□□□ -0.49
VTA1-203ENST00000452973 PHGDHO43175 533 aaKnown RBP11.96□□□□□ -0.49
VTA1-203ENST00000452973 PLIN3O60664 434 aa11.96□□□□□ -0.49
VTA1-203ENST00000452973 DNAJC6O75061 913 aa11.96□□□□□ -0.49
VTA1-203ENST00000452973 GJB3O75712 270 aa11.96□□□□□ -0.49
VTA1-203ENST00000452973 OR1E1P30953 314 aa11.96□□□□□ -0.49
VTA1-203ENST00000452973 HOXC13P31276 330 aa11.96□□□□□ -0.49
VTA1-203ENST00000452973 CCDC15Q0P6D6 951 aa11.96□□□□□ -0.49
VTA1-203ENST00000452973 SNCBQ16143 134 aa11.96□□□□□ -0.49
VTA1-203ENST00000452973 ARTNQ5T4W7 220 aa11.96□□□□□ -0.49
VTA1-203ENST00000452973 MARC1Q5VT66 337 aa11.96□□□□□ -0.49
VTA1-203ENST00000452973 TIGD7Q6NT04 549 aaPredicted RBP11.96□□□□□ -0.49
VTA1-203ENST00000452973 KYAT3Q6YP21 454 aaKnown RBP11.96□□□□□ -0.49
VTA1-203ENST00000452973 FBXO22Q8NEZ5 403 aa11.96□□□□□ -0.49
VTA1-203ENST00000452973 AGR3Q8TD06 166 aa11.96□□□□□ -0.49
VTA1-203ENST00000452973 MOCOSQ96EN8 888 aa11.96□□□□□ -0.49
VTA1-203ENST00000452973 VPS39Q96JC1 886 aa11.96□□□□□ -0.49
VTA1-203ENST00000452973 BTN2A3PQ96KV6 586 aa11.96□□□□□ -0.49
VTA1-203ENST00000452973 ELAC1Q9H777 363 aaKnown RBP11.96□□□□□ -0.49
VTA1-203ENST00000452973 RTN3O95197 1032 aaPredicted RBP11.96□□□□□ -0.5
VTA1-203ENST00000452973 T-ENOLP0DO92 83 aa11.96□□□□□ -0.5
VTA1-203ENST00000452973 MAGEA11P43364 429 aa11.96□□□□□ -0.5
VTA1-203ENST00000452973 GLRBP48167 497 aa11.96□□□□□ -0.5
VTA1-203ENST00000452973 LIMK2P53671 638 aa11.96□□□□□ -0.5
VTA1-203ENST00000452973 GEMP55040 296 aa11.96□□□□□ -0.5
VTA1-203ENST00000452973 WNT3AP56704 352 aa11.96□□□□□ -0.5
VTA1-203ENST00000452973 DSC2Q02487 901 aa11.96□□□□□ -0.5
VTA1-203ENST00000452973 GRM3Q14832 879 aa11.96□□□□□ -0.5
VTA1-203ENST00000452973 SPATA6LQ8N4H0 392 aa11.96□□□□□ -0.5
VTA1-203ENST00000452973 SPPL2BQ8TCT7 592 aa11.96□□□□□ -0.5
VTA1-203ENST00000452973 CCL22O00626 93 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 ZNF189O75820 626 aaPredicted RBP11.95□□□□□ -0.5
VTA1-203ENST00000452973 HAUS5O94927 633 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 ATF6P18850 670 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 MPP1Q00013 466 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 ITGA9Q13797 1035 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 ZNF460Q14592 562 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 POLD3Q15054 466 aaPredicted RBP11.95□□□□□ -0.5
VTA1-203ENST00000452973 PCID2Q5JVF3 399 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 DENND5AQ6IQ26 1287 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 MSANTD2Q6P1R3 559 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 PPHLN1Q8NEY8 458 aaKnown RBP11.95□□□□□ -0.5
VTA1-203ENST00000452973 ACMSDQ8TDX5 336 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 MRGPRX2Q96LB1 330 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 C1orf74Q96LT6 269 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 PPARGC1AQ9UBK2 798 aaKnown RBP11.95□□□□□ -0.5
VTA1-203ENST00000452973 SCN5AQ14524 2016 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 GSRP00390 522 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 GNRH1P01148 92 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 C2P06681 752 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 COL6A1P12109 1028 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 RHOQP17081 205 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 ACVRL1P37023 503 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 SERPINB8P50452 374 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 APLP1P51693 650 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 OCRLQ01968 901 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 NAB1Q13506 487 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 USP10Q14694 798 aaKnown RBP11.95□□□□□ -0.5
VTA1-203ENST00000452973 PCLAFQ15004 111 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 TRIP4Q15650 581 aaPredicted RBP11.95□□□□□ -0.5
VTA1-203ENST00000452973 ANO4Q32M45 955 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 PKN3Q6P5Z2 889 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 ANKS3Q6ZW76 656 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 ARHGEF3Q9NR81 526 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 ARL8BQ9NVJ2 186 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 MKS1Q9NXB0 559 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 ACTL7AQ9Y615 435 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 SLC38A8A6NNN8 435 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 KLF11O14901 512 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 PSMD3O43242 534 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 RAMP2O60895 175 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 AHSGP02765 367 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 CPA2P48052 419 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 SLC1A6P48664 564 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 RENBPP51606 427 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 E2F5Q15329 346 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 ASRGL1Q7L266 308 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 LGI2Q8N0V4 545 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 EBF4Q9BQW3 602 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 NMUR2Q9GZQ4 415 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 CLIC5Q9NZA1 410 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 DNAJC16Q9Y2G8 782 aa11.95□□□□□ -0.5
VTA1-203ENST00000452973 H7C4K7 107 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 BUD23O43709 281 aaKnown RBP11.94□□□□□ -0.5
VTA1-203ENST00000452973 ATP6V1G2O95670 118 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 IRF1P10914 325 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 ALDH18A1P54886 795 aaKnown RBP11.94□□□□□ -0.5
VTA1-203ENST00000452973 ZNF33AQ06730 810 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 RCN2Q14257 317 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 ARHGEF6Q15052 776 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 MBLAC2Q68D91 279 aa11.94□□□□□ -0.5
VTA1-203ENST00000452973 PDPK2PQ6A1A2 396 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms