RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 C3orf20Q8ND61 904 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 BAHD1Q8TBE0 780 aaPredicted RBP13.17□□□□□ -0.3
CHD3-206ENST00000452447 FAM172AQ8WUF8 416 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 AGPAT1Q99943 283 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 TMEM121BQ9BXQ6 578 aaPredicted RBP13.17□□□□□ -0.3
CHD3-206ENST00000452447 RAB6CQ9H0N0 254 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 OSBPL2Q9H1P3 480 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 HSD3B7Q9H2F3 369 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 TNKS2Q9H2K2 1166 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 RETREG1Q9H6L5 497 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 PREBQ9HCU5 417 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 ZNF212Q9UDV6 495 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 DMTF1Q9Y222 760 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 BTBD3Q9Y2F9 522 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 FAM208BQ5VWN6 2430 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 A0A1W2PR77 199 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 FAM221BA6H8Z2 402 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 GOLGA8CPA6NN73 597 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 TLR4O00206 839 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 MAGEC1O60732 1142 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 ITGAVP06756 1048 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 ATP1A3P13637 1013 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 FERP16591 822 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 GPD1P21695 349 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 MAPKAPK2P49137 400 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 ARRB1P49407 418 aaPredicted RBP13.16□□□□□ -0.3
CHD3-206ENST00000452447 SERPINH1P50454 418 aaKnown RBP13.16□□□□□ -0.3
CHD3-206ENST00000452447 HDAC4P56524 1084 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 GSCP56915 257 aaPredicted RBP13.16□□□□□ -0.3
CHD3-206ENST00000452447 NRG1Q02297 640 aaPredicted RBP13.16□□□□□ -0.3
CHD3-206ENST00000452447 ANO6Q4KMQ2 910 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 ARSIQ5FYB1 569 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 DNAJC24Q6P3W2 148 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 WDR59Q6PJI9 974 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 DPY19L3Q6ZPD9 716 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 KDF1Q8NAX2 398 aaPredicted RBP13.16□□□□□ -0.3
CHD3-206ENST00000452447 CHST14Q8NCH0 376 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 GRIN3AQ8TCU5 1115 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 CENPIQ92674 756 aaPredicted RBP13.16□□□□□ -0.3
CHD3-206ENST00000452447 PPP1R16AQ96I34 528 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 CEP44Q9C0F1 390 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 TMEM63CQ9P1W3 806 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 ARHGAP20Q9P2F6 1191 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 IL36AQ9UHA7 158 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 DNAI1Q9UI46 699 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 ZMIZ1Q9ULJ6 1067 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 LAMA5O15230 3695 aa13.16□□□□□ -0.3
CHD3-206ENST00000452447 SIGLEC16A6NMB1 481 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 SMTNL1A8MU46 457 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 PRAMEF26H0Y7S4 382 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 YKT6O15498 198 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 TNFSF14O43557 240 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 ZMPSTE24O75844 475 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 LRIG2O94898 1065 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 PLEKP08567 350 aaPredicted RBP13.15□□□□□ -0.3
CHD3-206ENST00000452447 ATXN1LP0C7T5 689 aaKnown RBP13.15□□□□□ -0.3
CHD3-206ENST00000452447 RHOQP17081 205 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 DESP17661 470 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 ARF5P84085 180 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 C1QBPQ07021 282 aaKnown RBP13.15□□□□□ -0.3
CHD3-206ENST00000452447 OVGP1Q12889 678 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 ARTNQ5T4W7 220 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 PIP5KL1Q5T9C9 394 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 MANEALQ5VSG8 457 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 NEK5Q6P3R8 708 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 SCYL2Q6P3W7 929 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 MON1BQ7L1V2 547 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 APTXQ7Z2E3 356 aaKnown RBP13.15□□□□□ -0.3
CHD3-206ENST00000452447 SLFN11Q7Z7L1 901 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 IQCHQ86VS3 1027 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 GATAD2AQ86YP4 633 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 OXR1Q8N573 874 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 PCDH20Q8N6Y1 951 aaKnown RBP13.15□□□□□ -0.3
CHD3-206ENST00000452447 CCDC185Q8N715 623 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 NTAN1Q96AB6 310 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 TBC1D31Q96DN5 1066 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 TMEM248Q9NWD8 314 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 FTSJ1Q9UET6 329 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 HPCAL4Q9UM19 191 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 PLXNB3Q9ULL4 1909 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 FAM72CH0Y354 149 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 SLC31A1O15431 190 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 RNGTTO60942 597 aaKnown RBP13.15□□□□□ -0.3
CHD3-206ENST00000452447 LEFTY1O75610 366 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 PCDH8O95206 1070 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 ZNF143P52747 638 aaPredicted RBP13.15□□□□□ -0.3
CHD3-206ENST00000452447 GEMIN4P57678 1058 aaKnown RBP13.15□□□□□ -0.3
CHD3-206ENST00000452447 NXPH1P58417 271 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 TAS2R38P59533 333 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 FILIP1LQ4L180 1135 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 CCDC157Q569K6 752 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 CARD16Q5EG05 197 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 FAM72AQ5TYM5 149 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 FAM72DQ6L9T8 149 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 DCUN1D2Q6PH85 259 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 ERN2Q76MJ5 926 aaKnown RBP13.15□□□□□ -0.3
CHD3-206ENST00000452447 FAM72BQ86X60 149 aa13.15□□□□□ -0.3
CHD3-206ENST00000452447 ZCCHC14Q8WYQ9 949 aaKnown RBP13.15□□□□□ -0.3
CHD3-206ENST00000452447 ARHGEF2Q92974 986 aaKnown RBP13.15□□□□□ -0.3
CHD3-206ENST00000452447 ARRDC3Q96B67 414 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms